Bordetella bronchiseptica 253: BN112_2545
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Entry
BN112_2545 CDS
T02344
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN112_2545 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbh03400
]
BN112_2545 (mutM)
Enzymes [BR:
bbh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN112_2545 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN112_2545 (mutM)
DNA repair and recombination proteins [BR:
bbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN112_2545 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
C1_2
DUF7573
RNHCP
Motif
Other DBs
NCBI-ProteinID:
CCJ54462
UniProt:
A0A0C6P765
LinkDB
All DBs
Position
2747095..2747826
Genome browser
AA seq
243 aa
AA seq
DB search
MRWPIPPALPDLLAGRTVLECGRRGKYLLLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHD
HVDWVFDHAVLRLHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAYFR
GRRVAIKQALLAGDAVVGVGNIYASESLFRAGIDPRTAAQRVSAARCDRLAAAIRATLSD
ALDSGGSTLRDYVGASGEPGAYFAIHAAVYERAGLPCRVCGTPIRRLVQGQRATYFCPSC
QKR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggcccattccacccgccctgcccgatctgctggccggccgcaccgtgctcgaa
tgcgggcggcgcggcaaatacctgctgctgcgcttcgaccatggcgtgcagatcgtgcat
ctgggcatgtccggatcgctgcgccgggtgcccgaacaggaggcgccgcgcaagcacgac
cacgtcgactgggtattcgaccacgccgtcctgcggctgcacgatccgcgccgcttcggc
gcggtgctgtggcaccccgacgaggccggcccgatcgccgcccacccgctgctggcccgc
ctgggcatcgaaccgttcgacccgcgctttgacgggcgctggctgcacgcctacttccgc
ggacgccgggtcgccatcaagcaggccctgctggccggcgacgccgtggtgggcgtgggc
aacatctacgcatcggaaagcctgtttcgcgccggcatcgatccgcgcacggccgcccag
cgcgtctcggcggcgcgctgcgaccggctggcggccgccatccgcgccaccctgtcggac
gcgctggattccggcggcagcacgctgcgcgactacgtcggcgccagcggcgagccgggc
gcgtatttcgccatccacgccgccgtctacgagcgcgccggcctgccctgccgcgtgtgc
ggcacgccgatccgccgcctggtgcagggtcagcgcgccacgtatttctgtccgagctgc
cagaaacgctag
DBGET
integrated database retrieval system
