Bordetella bronchiseptica 253: BN112_2979
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Entry
BN112_2979 CDS
T02344
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bbh
Bordetella bronchiseptica 253
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbh03016
]
BN112_2979
Enzymes [BR:
bbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BN112_2979
Transfer RNA biogenesis [BR:
bbh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BN112_2979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CCJ54896
UniProt:
A0A0C6P9W5
LinkDB
All DBs
Position
3227217..3227804
Genome browser
AA seq
195 aa
AA seq
DB search
MLRSSRASNDNARMAHPPTEAAIAPPRLFFALWPDPATAARLADWAAHAQLAYGGRVMRT
DTLHLTLAFLGAATPAQAAELCAATAARRIAPATLALARYGLFARQRIVWAGPQQADAAL
AALHDDLWTWLRALGWPAPQQGFQPHVTLLRNVDAHAAAPAPPPPVAWRYDHYALVQSQP
QHGRASYRVLARTAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcggtccagccgcgcttcgaacgataatgcccgcatggcccacccacccaccgaa
gcggcgatcgcgccgccccgcctgttcttcgccctgtggccggaccccgccacggcggcc
cggctggcggattgggcggcgcacgcgcagctggcatacggcggacgcgtcatgcgcacc
gataccctgcacctgacgctggcgttcctgggcgcggccacgcccgcccaggccgccgag
ctgtgcgccgccaccgcggcacggcgcatcgcgccggccaccctggcgctggcccgctat
ggcctgttcgcccgccaacgcatcgtctgggccggcccgcagcaggccgacgccgcgctg
gcggcgctgcacgacgacttgtggacgtggctgcgcgcgctgggctggcccgcgccgcag
cagggtttccagccgcatgtcacgctgctgcgcaacgtggacgcccatgccgccgcgccc
gcgccgccgccgcccgtggcgtggcgctacgaccactacgcgctggtgcagtcgcagccg
cagcacggacgggccagctaccgggtgctggcgcgcacggcagcctag
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