Bordetella bronchiseptica 253: BN112_3163
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Entry
BN112_3163 CDS
T02344
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bbh
Bordetella bronchiseptica 253
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbh03009
]
BN112_3163
Enzymes [BR:
bbh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BN112_3163
Ribosome biogenesis [BR:
bbh03009
]
Prokaryotic type
ribosomal protein modification factors
BN112_3163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CCJ55080
UniProt:
A0A0C6P8X9
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All DBs
Position
3419271..3420590
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AA seq
439 aa
AA seq
DB search
MSSPKVGFVSLGCPKALVDSERILTQLRTEGYEVTPEYNDADVVVVNTCGFIDSAKAESL
EAIGEAIAENGKVIVTGCMGVEESVIRQVHPSVLAVTGPQQYEEVVRAVHGVAPPRQDHN
PYLDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLSEAERLVR
AGVKELLVISQDTSAYGVDIKYRSGFWNGRPVKTRMTELCAALSELGVWTRLHYVYPYPH
VDEVIGLMADGKVLPYLDIPFQHASPRILRAMKRPAFEDKTLARIKRWREECPDLTLRST
FIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANALDNPVPDEVKQERWERF
MEHQQAISTARLSTRVGREIDVLIDSVDEEGAVGRSSADAPEIDGCVYVDSEQPLKAGDM
VRVRVTDSDEYDLWGERIA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccccaaagtcggcttcgtcagcctcggctgtcccaaggccctggtcgattcc
gaacgcatcctgacccagcttcgcaccgagggctacgaggtcacgcccgaatacaacgac
gccgatgtcgtcgtggtcaacacctgtggcttcatcgacagcgccaaggccgaatcgctc
gaagcgatcggcgaggccatcgccgaaaacggcaaggtcatcgtgaccggctgcatgggc
gtggaggaatccgtcatccggcaggtgcaccccagcgtgctggccgtgaccggaccgcag
cagtacgaggaagtggtgcgcgcggtgcacggcgtggcgccgccccgccaggaccacaac
ccgtacctggacctggtcccgccgcaaggcgtcaagctgacgccgcgccattatgcctac
ctgaagatttccgaaggctgcaaccatcgctgcagcttctgcatcatcccctccatgcgc
ggcgacctggtgagccggccggtgggcgacgtgctcagcgaggccgagcggctggtccgg
gccggcgtcaaggaactgctggtcatctcgcaggacaccagcgcctatggcgtggacatc
aaataccgcagcggcttctggaatggccggccggtcaagacgcgcatgaccgagctgtgc
gccgcgctgtccgagctgggcgtgtggacccgcctgcattacgtctatccgtatccgcac
gtggacgaagtgatcggcctgatggccgacggcaaggtgctgccctatctggacatcccg
ttccagcatgccagcccgcgcatcctgcgcgccatgaagcgcccggcgttcgaggacaag
acgctggcgcgcatcaagcgctggcgcgaggagtgccccgacctgacgctgcgctcgacg
ttcatcgtgggctttccgggcgagaccgaggaggacttccagtacctgctggactggatg
agcgaagcccagctcgaccgcgtcggctgcttccagtactcgccggtcgaaggcgcgccg
gccaatgccctggacaaccccgtgccggacgaggtcaagcaggagcgctgggagcgcttc
atggaacaccagcaggccatctcgaccgcgcgcctgagcacgcgggtgggccgggagatc
gacgtgctgatcgacagcgtggacgaggaaggcgcggtcggccgctccagcgccgacgcg
ccggagatcgacggctgtgtctacgtagacagcgagcagccgctgaaggccggcgacatg
gtgcgcgtgcgcgtcaccgactccgacgagtacgacctctggggcgagcggatcgcctga
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