Bordetella bronchiseptica 253: BN112_3344
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Entry
BN112_3344 CDS
T02344
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh00300
Lysine biosynthesis
bbh00470
D-Amino acid metabolism
bbh01100
Metabolic pathways
bbh01110
Biosynthesis of secondary metabolites
bbh01120
Microbial metabolism in diverse environments
bbh01230
Biosynthesis of amino acids
Module
bbh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN112_3344 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN112_3344 (lysA)
Enzymes [BR:
bbh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN112_3344 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CCJ55258
UniProt:
A0A0C6P709
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All DBs
Position
3616504..3617793
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AA seq
429 aa
AA seq
DB search
MTAVSVQPDLAGSPHFRYQNGVLHAEDVPLDSLAAQLGTPLYVYSRAALRSAWETYRDAI
GERPVLVCFGMKANSNLAVLKEFARLGAGFDIVSGGELARVLAVGGDPAKVVFSGVGKQA
WEMRAALEADVKCFNVESEAELERLSDVAVSMGRRARVSLRVNPDVDAQTHPYISTGLKE
NKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQLTDISPYFDALEKLLDLIEQLAENG
IAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERINARGLGHLHIVLEPGRSLVGNAGVL
LTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHGVQPVTPRADKRIEYDVVGPVCESA
DWLARGRALAIQAGDVLAVESAGAYSMVMASNYNTRVRAAEVMVDGNRHYIVRQRETLES
LYQGESTLP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgtttccgtccagcccgacctggctggctcgccccatttccgctaccagaac
ggcgtgctgcacgccgaagacgtgccgctcgacagcctggccgcccagctgggcacgccg
ctgtacgtctattcccgcgccgcgctgcgctcggcctgggagacctatcgcgacgccatc
ggcgagcgcccggtgctggtgtgcttcggcatgaaggccaactccaacctggccgtgctg
aaggaattcgcacgcctgggcgccggcttcgacatcgtgtccggcggcgagctggcgcgc
gtgctggccgtgggcggcgaccccgccaaggtcgtgttctccggcgtgggcaagcaggcc
tgggaaatgcgcgccgcgctcgaagccgacgtgaagtgcttcaacgtcgagtccgaggcc
gaactcgagcgcctgtccgacgtcgccgtctccatgggccggcgcgcgcgcgtatcgctg
cgcgtcaaccccgacgtcgacgcccagacccatccctacatctcgacgggcctgaaggaa
aacaagttcggcatcgccatcgagtccgcgccggcggcataccggctggcggctcgcctg
cccggcgtcgaagtggttggcgtcgattgccatatcggctcgcagctcaccgacatcagc
ccgtacttcgacgcactggaaaagctgctggacctgatcgagcagctggccgagaacggc
atcgccatcaagcacctggacctcggcggcggcctgggcatccgctacacggacgaaatc
ccgccctcgcccaaggccttgctcgaccgggtgttcgagcgcatcaacgcgcgcggcctg
gggcacctgcatatcgtgctggaacccggccgctcgctggtcggcaatgccggcgtgctg
ctgaccacggtgcaatacctcaagcacgccgaggcgcgcaacttcgccattgtcgacgcc
gccatgaacgacctgctgcgcccggccctgtacgaggcctaccacggcgtgcagccggtc
acgccgcgggccgacaagcggatcgagtacgacgtcgtcgggccggtctgcgaaagcgcc
gactggctggcgcgcggccgcgccctggcgatccaggccggcgacgtgctggcggtggag
tcggccggcgcctacagcatggtcatggccagcaactacaacacccgggtgcgcgcggcc
gaagtcatggtcgacggcaaccgccactacatcgtgcgccagcgcgaaacgctggagtcg
ctgtaccagggcgagtccacgctgccctga
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