Bordetella bronchiseptica 253: BN112_3438
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Entry
BN112_3438 CDS
T02344
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bbh
Bordetella bronchiseptica 253
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbh03032
]
BN112_3438 (gyrB)
03400 DNA repair and recombination proteins [BR:
bbh03400
]
BN112_3438 (gyrB)
Enzymes [BR:
bbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BN112_3438 (gyrB)
DNA replication proteins [BR:
bbh03032
]
Prokaryotic type
DNA Topoisomerases
BN112_3438 (gyrB)
DNA repair and recombination proteins [BR:
bbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN112_3438 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CCJ55352
UniProt:
A0A0C6PB64
LinkDB
All DBs
Position
3709783..3712236
Genome browser
AA seq
817 aa
AA seq
DB search
MSDQQNTTPENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEA
LAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSY
KVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRF
LADPAIFTNIEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYIN
RSKSVLHPNVFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLR
AAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVR
PAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGK
LADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQ
IATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHV
YIAQPPLYKVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQY
VLADAVISRLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLSDALHAASPANGVEVVA
EYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRGADYAVLAKSAKTFLGLVGAGAIVARGE
GDKRKEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQI
EDAIAADEVFTTLMGDDVEPRRAFIETHALSAGNIDA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcaacagaacaccactcccgagaacaccggctatggcgccgattcgatcaag
atgctcaaggggctggaggccgtgcgcaagcgcccaggcatgtacatcggcgatacctcc
gatggcacgggcttgcaccacatggtgttcgaagtggtcgacaacgcgatcgacgaggcg
ctggcgggccattgcgacgacatcgtcgtcaccatccataccgacaactcgatctccgtc
accgacaacggccgcggcatcccgaccgacatccacaaggatgacgagttcggccgcagc
gccgccgaaatcgtgatgaccgagctgcacgcgggcggcaagttcgaccagaactcgtac
aaggtgtcgggcggcctgcacggcgtgggcgtatcctgcgtgaacgccctgtccgagtgg
ctgcgcctgacgatccgccgcaacggccaggtgcatcagatggaattccgccaggggcag
cgcgtcgcgcccctgacggcgaccggcccgaccgacaagcgcggcacggaagtgcgtttc
ctggccgatccggccatcttcaccaacatcgagtaccactacgagattctctcgaagcgc
ctgcgcgagctgtcgttcctgaacaatggcgtgaaggtccgcctggtcgaccagcgccag
ggcaaggaggagaactttgcgttctccggcggcgtgaaagggtttgtcgagtacatcaac
cgcagcaagtcggtgctgcatcccaacgtgttcgcggtcagcgccgaatcgtcggccggc
ggcgtgctggtgggcgtggaagtggccatgcagtggaacgacagctacagcgaaagcgtg
ctgtgtttcaccaacaacattccgcagcgcgacggcggcacgcacctgacgggcctgcgc
gcggccatgacgcgcgtgctcaacaagtacatcgccgacaacgagctggccaagaaggcc
aaggtcgagaccaccggcgacgacatgcgcgaaggcctggcctgcgtgctgtcggtgaag
gtgcccgagcccaagttcagcagccagaccaaggacaagctggtctccagcgaagtgcgt
ccggccgtcgaggacgcggtggcgcgcacgctggaaacctggctgctggagcaccccaac
gacgccaaggcgctgtgcggcaagatcgtcgaggccgcgcgtgcgcgcgaggcggcgcgc
aaggcgcgcgagatgacgcgccgcaagagcgtgctggaaggcgccggcctgcccggcaag
ctggccgactgtcaggaaaaggacccggcgctgtgcgagctgtacatcgtcgagggcgat
tcggcaggcggttcggccaagcagggccgcgaccgcaagttccaggccatcctgcccctg
cgcggcaaggtgctcaacgtcgagaaggcgcgttttgaccgcctcatcgccagcgagcag
atcgccacgctgatcacggccctgggcaccagcatcggccccgatttcaatatcgacaag
ctgcgctaccaccgcctgatcatcatgaccgacgcggacgtggacggcgcgcacatccgc
acgctgctgctgacgctgctgtatcgccagatgcccgagctggtggcgcgcggccacgtc
tatatcgcgcagccgccgctgtacaaggtcaaggtcggccgcgacgagcgctacctgaag
gatgaccaggaagaagcgcaattcatgctgcaactggcgctcaaggacgccgagctgatt
cccagccagggcgccgccccgatccgtggcgaggcgctcaacgaactggcgcgccagtac
gtgctggccgacgcggtcatttcccgcctgtcgcgcgtgttcgacgtggccgcgctgtcg
gcgctggccgaaggcgtcgagatcgacctcgaggacgccgaacgcaccaaggcatcggcg
cagcgcctgtccgacgcgttgcacgcggccagccccgccaatggcgtggaagtggtggcc
gagtacgacgacgtggccgaaaagcaccgcctggcggtgcgccgcatgcaccacggcaac
gtgcgtgtcagcgtgctggatgcggacttcgtgcgcggcgccgactacgcggtgctggcc
aagtcggccaagacgttcctgggcctggtcggcgccggcgccatcgtggcgcgtggcgaa
ggcgacaagcgcaaggaacagttcgtgtccgatttccgcgaggccatgcaatggttgcgc
ggcgaagccgagcgcggcctgagcaagcagcgctacaagggcctgggcgaaatgaacccg
gagcagttgtgggaaaccacgatggacccgaaggtgcgccgcctgctgcgggtgcagatc
gaagatgccatcgcggcggacgaggtcttcaccacgctgatgggcgacgacgtcgagccg
cgccgcgcgttcatcgaaacgcatgcgctgtcggcgggcaacatcgacgcctga
DBGET
integrated database retrieval system
