Bordetella bronchiseptica 253: BN112_3511
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Entry
BN112_3511 CDS
T02344
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bbh
Bordetella bronchiseptica 253
Pathway
bbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN112_3511 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbh03019
]
BN112_3511 (rhlE)
Enzymes [BR:
bbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BN112_3511 (rhlE)
Messenger RNA biogenesis [BR:
bbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BN112_3511 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCJ55425
UniProt:
A0A0C6P9Z9
LinkDB
All DBs
Position
complement(3793944..3795389)
Genome browser
AA seq
481 aa
AA seq
DB search
MRAIADTGYTAPTPIQAQAIPLVLQGGDLLAAAQTGTGKTAGFTLPILHRLMQTKPAARK
PGRPRCLILTPTRELTAQVAESVQTYGKYASLSSMVMFGGVNINPQISALKKPLDILVAT
PGRLLDHAGQKTVDLSGVEILVLDEADRMLDMGFIRDIRKVLALLPKQRQNLLFSATFSD
EIRSLARGVLNDPGEVSVTPRNTATELVTQTVHLVEQHHKRDLVSHLIRESGWHQVLVFT
RTKHGANRLAEKLVKDGLSAAAIHGNKSQSARTRALSGFKDGSVAVLVATDIAARGLDID
QLPQVVNFELPNVPEDYVHRIGRTGRAGATGAAVSLVDDSEIKLLKAIERLIKKPIERRA
VDGWTPPAGGPTAEDRADREREMRDDDRGRGRRGGRGGDRGQRAGGDNRAPQARDGQRRA
TGAHPQGSAPRNAAGPRADAKRNDAGRPQGRAPGEAGAARAPAPARNRPAGNGTRGVLLG
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgcgatcgccgataccggctatacggcgcccacccccatccaggcgcaagccatc
ccgctggtgctgcaaggcggcgacctgctggccgccgcgcaaaccggcaccggcaagacc
gcggggttcaccctgcccatcctgcaccggctgatgcagaccaagcccgccgcgcgcaag
cctggccgcccgcgctgcctgatcctcacccccacccgcgagctcaccgcccaggtggcc
gaatcggtgcagacctacggcaagtacgccagcctgagctccatggtgatgttcggcggc
gtcaacatcaatccgcagatcagcgccctgaaaaagccgctcgacatcctggtggccacg
cccggccgcctgctcgaccatgccggccagaaaacggtcgacctctccggcgtggaaatc
ctggtgctggacgaagccgaccgcatgctggacatgggcttcatccgcgacatccgcaag
gtactggcgctgctgcccaagcaacgccagaacctgctgttctccgccaccttctcggac
gaaatccgctcgctggcgcgcggcgtgctcaacgatccgggcgaagtctcggtcacgccg
cgcaacaccgccaccgaactggtcacccagacggtgcacctggtcgaacagcaccacaag
cgcgacctcgtcagccacctgatccgcgaaagcggctggcaccaggtactggtgttcacc
cgcaccaagcacggcgccaaccggctggccgagaagctggtcaaggacggcctgagcgcg
gccgccatccatggcaacaagagccagtcggcgcgtacccgcgccctgtcgggcttcaag
gacggcagcgtggccgtgctggttgccaccgacatcgccgcgcgcggcctggacatcgac
caactgccgcaagtggtcaacttcgaactgcccaacgtccccgaggactacgtgcaccgc
atcggccgcaccggccgtgccggcgccaccggcgcggcggtctcgctggtggacgatagc
gagatcaagctgctcaaggccatcgaacgcctgatcaagaagcccatcgaacgccgcgcc
gtcgacggctggacgccgcctgccggcggcccgaccgccgaggaccgcgccgatcgcgag
cgcgaaatgcgcgacgacgatcgcggccgcggccgccgcggtggccgtggcggcgatcgc
ggccagcgcgccggcggcgacaaccgcgccccccaggcgcgcgacggccagcgtcgcgcc
acgggcgcccatccgcaaggcagcgcgccgcgcaacgccgccggcccgcgcgccgacgcc
aagcgcaacgacgctggccgcccccaggggcgtgcccccggcgaagcgggtgcggcccgc
gcgccggccccggcgcgcaaccggcccgccggcaacggcacgcgcggcgtgttgctgggc
aagtaa
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