KEGG   Bordetella bronchiseptica 253: BN112_3888
Entry
BN112_3888        CDS       T02344                                 
Name
(GenBank) putative endonuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bbh  Bordetella bronchiseptica 253
Pathway
bbh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN112_3888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbh03400]
    BN112_3888
Enzymes [BR:bbh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BN112_3888
DNA repair and recombination proteins [BR:bbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BN112_3888
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: CCJ55802
UniProt: A0A0C6P7R1
LinkDB
Position
complement(4175326..4176114)
AA seq 262 aa
MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH
AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWKDLSVISAYLPSGSSGDERQ
QAKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEER
AWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARAT
SIYKDERFSDHAPLTVDYDIAL
NT seq 789 nt   +upstreamnt  +downstreamnt
ttgctgcgtatcacctcgctcaacctcaacggtatccgttccgccttccgcaagggcctg
cagccctggatgaccgcccacaacgccgatgtactgtgcctgcaggagatcaaggtctcg
catgacgacctgaccgacgagctgcgccacccgcctggctatacgggtcacttccaccac
gccgagaaaaagggctacagcggcgtgggcatgtacctgcgcgccggcgccgaacgcgtg
gtggccggcttcgattgcgaggagttcgacgcggaaggccgcatcctgcgcgccgactgg
aaggatctgtcggtcatcagcgcctacctgccctcgggttcgagcggcgacgagcgccag
caggccaagtaccgcttcctggaccagttcggcccatggctggacggcctgatggccgag
cacaggaagaccggacgcgaattcgtcatctgcggcgactggaacatcgcccacaaggaa
atcgacctgaagaactggaagggcaaccagaagaactcgggcttcctgcccgaggagcgc
gcctggctgaccgaggtgttcgaccggcgcggcttcgtcgacgtcttccgcaagctggac
gagcgcgccgaccagtacacctggtggagcaatcgcggccaggcctgggccaagaacgta
gggtggcgcatcgactaccagatcgccaccccgggtatcgccgaacgcgcacgcgccact
tccatctacaaggacgagcggttttccgaccacgcgccgctgacggtggactacgacatc
gccctgtaa

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