Bordetella bronchiseptica 253: BN112_4055
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Entry
BN112_4055 CDS
T02344
Symbol
dbpA
Name
(GenBank) probable ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bbh
Bordetella bronchiseptica 253
Brite
KEGG Orthology (KO) [BR:
bbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbh03009
]
BN112_4055 (dbpA)
Enzymes [BR:
bbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BN112_4055 (dbpA)
Ribosome biogenesis [BR:
bbh03009
]
Prokaryotic type
rRNA helicases
BN112_4055 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCJ55969
UniProt:
A0A0C6PC50
LinkDB
All DBs
Position
4358793..4360181
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AA seq
462 aa
AA seq
DB search
MTNTSFSSLPLLPALLDNLQGLGFEQMTPIQAQSLPLILEGRDLIAQAKTGSGKTAAFGL
GVLQNLDVNRLAPQALVLCPTRELADQVAQELRRLARLIPNVKVLTLCGGAAARPQAESL
ARGTHLVVGTPGRIQDHLARGSLDLSTLNTLVLDEADRMVDMGFYDDIAAIASHCPARRQ
TLLFSATYPDNIRKLSARFLRNPAEIKVEAQHDASRIEQLFFEIDEGQRLDAVAALLAHF
RPASTLAFCNTKIRSHDLVERLRAQGISAQALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRGDQKGLALSLCSPEEMRWANLIEQY
QGAPLKWADLGSLRPKSDRPLRAPMITLCIQGGKKDKLRPGDLLGALTGDGGLAFEQVGK
INITEFNAYVALDRQVAKQAFARLSNSNIKGRRFRMRFLEEF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacgtctttttcctccctgcctcttctgcccgccttgctcgacaacctgcaa
ggcctgggcttcgaacagatgacgccgatccaggcgcaaagcctgccgctcatcctggaa
ggccgcgacctgatcgcgcaagccaagaccggcagcggcaagaccgccgcattcggcctg
ggcgtgctgcagaacctggacgtcaaccgcctggcgccgcaggcgctggtgctctgtccc
acccgcgaactggccgaccaggtggcccaggagctgcgccggctggcccgcctgattccc
aacgtcaaggtgctgacgctgtgcggcggcgccgccgcgcgtccccaggccgaatcgctg
gcgcgcggcacgcatctggtggtgggtacgcccggccgcatccaggaccacctggcgcgc
ggcagcctggacttgtccacgctgaacacgctggtgctggacgaggccgaccgcatggtg
gacatggggttctacgacgacatcgccgccattgcctcgcattgcccggccaggcggcag
accctgctgttctcggccacctaccccgacaacatccgcaagctgagcgcccgcttcctg
cgcaatccggccgaaatcaaggtggaggcccagcacgacgccagccgcatcgagcagctc
ttcttcgagatcgacgaaggccagaggctggatgccgtggcggcgctgctggcccacttc
cgcccggcgtccacgctggcgttctgcaacaccaagatccgcagccacgacctggtcgaa
cgcctgcgcgcccagggcatcagcgcccaggcgctcaacggcgacctggagcagcgcgag
cgcgatgaaatcctgatccagttcgccaaccagagctgcgccgtgctggtcgccaccgac
gtggccgcccgcgggctggacatccagaacctgggcgcggtcatcaacgtggacgtgacc
aaggacaccgaagtccacgtgcaccgcatcggccgcagcggccgcggcgaccagaaaggg
ctggcgctgagcctgtgttcgcccgaggaaatgcgctgggccaacctcatcgagcaatac
cagggcgccccgctgaaatgggccgacctcggctcgctgcggcccaagtccgaccgcccc
ttgcgcgcgcccatgatcaccctgtgcatccagggcggcaagaaggacaagctgcgtccc
ggcgacctgctgggcgccctgaccggtgacggcgggctggcgttcgagcaggtcggcaag
atcaacatcaccgaattcaacgcctatgtggcgctggaccgccaggtcgccaagcaggcc
ttcgcgcgcctgtccaacagcaatatcaagggacggcggttccgcatgcgcttcctggaa
gagttctga
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