Bifidobacterium bifidum S17: BBIF_0005
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Entry
BBIF_0005 CDS
T01328
Symbol
gyrA1
Name
(GenBank) gyrA1 DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbi03032
]
BBIF_0005 (gyrA1)
03400 DNA repair and recombination proteins [BR:
bbi03400
]
BBIF_0005 (gyrA1)
Enzymes [BR:
bbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBIF_0005 (gyrA1)
DNA replication proteins [BR:
bbi03032
]
Prokaryotic type
DNA Topoisomerases
BBIF_0005 (gyrA1)
DNA repair and recombination proteins [BR:
bbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBIF_0005 (gyrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
LAMB1
Motif
Other DBs
NCBI-ProteinID:
ADO52210
LinkDB
All DBs
Position
7732..10464
Genome browser
AA seq
910 aa
AA seq
DB search
MADENSNGTDLPEQNDERAEHSMEPISPQANEQLVLDDNRVAHTDIQKEMRQSYLDYAIS
VIVERALPDVRDGMKPVHRRIVYAMYDGGYRPDRGYSKCARPVADVMGNYHPHGDAAIYD
SLVRMAQPWSMRYTLVDGQGNFGSAGDDPPAAMRYTECRMMPLAMEMVRDIDKDTVDFVP
NYDGRTQEPTVLPARFPNLLANGSSGIAVGMATNIPPHNMRELAEGVHWTLDHPEASHEE
LLNALIGIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVVTELP
YQVNPDRLAASIREGVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLEVIERRTRYLKREAEERDHILQGLL
KAMDAIDEIIRLIRSSQGREDARPKLMEFLDIDQVQADAILSMQLVRLANMERQKIIDEH
EELMRKIADYNDILAKPERQRTIVGDELDEIVAKYGDERRTKILPYSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKANEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRTGKVKKT
ALAEYDSPRQGGLIAVRLAADEETGEPTDELIGAALCNAADDIILVSKQGMSLKFAADND
QLRPMGRQTAGVQGMKFRGDDELLAMDVVPEDSKQDLLVVTNEGFAKRTAISEYRLQGRN
GFGVKAVQLAEGRGSLVGALIVSEDDQVMAIMKSGKVIRSNVTEVKRTGRTTQGVTLAKP
DKGDEIISIARNEETGEDEVETTDDTAAAASATTSPDTAENTPDTTDSVASGSDSGAASD
ENVNNTDDEA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaaacagcaacggcaccgacctgccggagcagaacgacgagcgtgccgaa
cactcgatggagcccatcagccctcaggccaacgaacagttggtcctcgacgacaatcgt
gtggcccacaccgacatccagaaggagatgcgtcagtcgtacctcgactatgccatctcc
gtcatcgtcgaacgagcccttccggatgtgcgcgacggcatgaagccggtgcaccgccgc
atcgtgtacgcgatgtatgacggcggctaccgtcctgatcgcggctattccaagtgcgcc
cgacccgtcgccgacgtgatgggcaactaccacccacacggcgacgccgcgatctacgat
tcgctggtgcgcatggcccagccgtggtcgatgcgatacacgctggtcgacgggcagggc
aacttcggctcggccggtgacgacccgcccgcagccatgcgttacaccgagtgccgcatg
atgccgcttgcgatggaaatggtgcgagacatcgacaaggacaccgtcgacttcgtgccc
aactacgatggccgtacgcaggaacccaccgtgttgcccgcgcgcttcccgaacctgctg
gccaacggctcgtccggcatcgccgtcggcatggcgaccaacattccgccgcacaacatg
cgcgagctggcggaaggcgtgcattggacgctcgatcatcccgaagcgagccatgaagag
ctgctgaacgcactcatcggcatcatcaagggaccggacttcccgaccggcgccacgatc
ctcggccacaagggcatcgagcaggcgtaccgcaccggccgcggcctgattacgatgcgc
gcggtggtcaacaccgaggagatcaagggccgtatgtgcctggtggtcaccgagctgccg
tatcaggtgaatcccgaccgtctggccgcttccatccgagaaggcgtgcgcgacggcaag
atccagggcatcgccgacatgcgcgacgagacgtcgggccgtaccggccagcgactcgtg
ctcgtgctcaagcgcgacgccgtgccgaaggtcgtgctcaacaacctgtacaagcactcc
cagctgcagcagacgttcggcgcgaacatgctcgcgctggtcgacggcgtgccgcgcacg
ctgagcctcgacgccttcatccgccattgggtgaaccaccagctcgaagtcatcgaacgc
cgtacccgttacctcaagcgcgaggccgaggaacgcgaccacatcctgcagggcctgctc
aaggccatggacgccatcgacgagatcatccgcctcatccgctccagccagggccgcgag
gacgcccggccgaagctgatggagttccttgacatcgatcaggtgcaggccgacgccatc
ctttccatgcagctggttcgactggccaacatggaacgccagaagatcatcgacgagcat
gaggaactcatgcgcaagattgccgactacaacgacatcctcgccaagccggaacgccag
cgtacgatcgtcggcgacgagctcgacgagatcgtcgcgaaatacggtgacgaacgtcgc
acgaagatcctcccctactcgggcgagatgaacgtcgaagacctgatcgccgaggagaac
gtggtggtcaccgtcacgcactccggcttcatcaagcgcaccaaggccaacgaatatcgc
gcacagcatcgcggcggcaagggcatcaagggcgccaagctgcgtgaggatgacgtggtg
gatcacttcttcctcacgtccacgcataactggctgctgttcttcaccaacaagggccgc
gtctaccgcatcaaggcgtacgagctgcccgaaggctcgcgcgattccaagggccagcac
gtggcgaacctgctgcagttcggtcccgacgagacgattcagaccgtgctgtcgattccg
aactacgaggtcgccaagtatctggtgcttgccacccgcaccggcaaggtcaagaagacc
gcgctggccgagtacgattcgccgcgtcagggcggactcatcgcggttcgtctcgcggcc
gacgaggagaccggcgagcccacggacgagctgatcggcgccgcgctgtgcaacgccgca
gacgacatcatcctcgtctccaagcagggcatgagcctcaagttcgcggcggacaacgac
cagctgcgtccgatgggacgccagaccgccggcgtgcagggcatgaagttccgcggggat
gacgaactgctcgccatggacgtggttccggaggactccaagcaggacctgctcgtggtc
accaatgagggcttcgccaagcgcaccgcgatcagcgaataccgactgcaggggcgtaac
ggcttcggcgtcaaggcggtacagctcgccgaaggtcgcggatcgctggtcggtgccctg
atcgtaagcgaagacgatcaggtcatggcgatcatgaagtccggcaaagtgatccgttcc
aacgtcaccgaggtcaagcgcaccggccgcaccacgcagggcgtgacgctcgctaagccc
gacaagggcgacgagattatctccatcgcccgcaacgaggaaaccggcgaagacgaagtc
gagacgacggatgatacggctgcggccgcatccgcgaccacgtctcccgatacggccgaa
aacactccggataccacggatagcgtcgcatccggcagtgattcgggcgcggcatctgac
gagaatgtgaacaacactgatgacgaggcataa
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