Bifidobacterium bifidum S17: BBIF_0158
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Entry
BBIF_0158 CDS
T01328
Symbol
degP
Name
(GenBank) Trypsin-like serine protease
KO
K08372
putative serine protease PepD [EC:3.4.21.-]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBIF_0158 (degP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbi01002
]
BBIF_0158 (degP)
Peptidases and inhibitors [BR:
bbi01002
]
Serine peptidases
Family S1: chymotrypsin family
BBIF_0158 (degP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ_6
PDZ
Peptidase_S46
DUF6264
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
ADO52363
LinkDB
All DBs
Position
167025..168932
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AA seq
635 aa
AA seq
DB search
MADNNNGYWPADNGGQPEQPQNDNLQQDAPTTSDAQDQQFAQEPLGAPQEAPAQNDDAQQ
PQPEAQDTRPTQPLAPVAPTSEQAQASEPTQPLPPQPTQPLYRPAPEYGAYGPTPTQPEP
QQPQPTQQQNQNTGNGGNPFFNGNPFMTRPTDDASQQNRQNGNTPYGFPFGPQGPNGGQD
QGMAQPEDGGNASRGGSSAASHIVTAVVAALVAAALCLGVGYFALTYGWVSTPTTTSLTN
VQSNKSGTGSATAKTGEAADWKTVASEVSGSVVSIQAALSNGTAKGSGAIVSAKGYIVTN
NHVISGAQQIQVTLSNGQMYTAQVVGTDTTTDLAVIKLDNPPSDLKAVEFADSDKLAVGE
DVMAIGNPLGYDDTATTGIVSALNRPVTVTDDSGSDIVTNAVQIDAAINPGNSGGPTFNA
AGQVIGINSSIASTATSSNSAGSIGIGFAIPSNLVKRVANEIIKDGKVKHVALGVTITTG
TVEADGVTRAGAKVTAGTSGSAVVSGSPADKAGLKVGDVIVAYDGNAVSSTYSLLGYVRA
SALNDKVTLTIVRGGKTMDVEVTLDKEESAVNGSGSSNSNNNQNNQNNQNGNGQNGNGNG
NGNNGNSNNGNGNDSNGYGNNDYGNGGFSDPFGLW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacaacaacggatactggcccgccgataacggcggccagcctgagcagccg
cagaacgacaacctgcagcaggacgctccgacgacctcggatgcgcaggatcagcaattc
gcccaggagccgctgggcgcgcctcaggaagcgcccgcgcagaacgacgacgcgcagcag
ccgcagcccgaagcgcaggatacccgtccgacccagccgttggcgcctgtcgcgccgacc
tcagagcaggcccaggcttccgaaccgactcagccgctgccgccgcagccgactcagccg
ctgtaccgcccggcaccggaatacggcgcctacggcccgactccgactcagccggagccc
cagcagccgcagccgacccagcagcagaatcagaacacgggcaacggcggcaacccattc
tttaacggcaacccgttcatgacgcgcccgacggacgacgcctcacagcagaatcgccag
aacggcaacacgccctacggtttcccgttcggcccgcaaggcccgaacggcggccaggat
cagggcatggctcagccggaagacggcggcaacgcgtctcgcggcgggagctccgcggcc
agccacatcgtgaccgcagtggtggccgccctggtggccgcggcgctgtgcctcggcgtt
ggatacttcgcgctcacctatggttgggtgagcacgccgacgacgacatcgctgaccaac
gtccagtcgaacaagtccggtaccggcagcgccaccgccaagacgggcgaggccgccgac
tggaagaccgtggcgagcgaggtctccggctccgtcgtgtcgattcaggcggcgctgagc
aacggcaccgccaaggggtcgggcgcgatcgtgagcgccaagggctacatcgtcaccaac
aaccacgtgatctccggcgcccagcagattcaggtgacgctgtccaacgggcagatgtac
accgctcaggtggtcggcaccgacaccaccaccgacctggcggtcatcaagctcgacaac
ccgccgagcgacctgaaggctgtggaattcgccgactccgacaagctcgccgtcggcgag
gacgtcatggccatcggcaacccgctgggctatgacgacaccgccaccaccggcatcgtg
tccgcgctgaaccgtccggtcaccgtgaccgatgactccggctccgacatcgtcaccaac
gcggtgcagatcgacgcggccatcaaccccggcaactcgggcggcccgacgttcaacgcc
gccggccaggtgattggcatcaactcgtcgatcgcctccaccgcgacctccagtaattcc
gccggctccatcggcatcggcttcgcgattccgtcgaacctcgtcaagcgcgtggccaac
gagatcatcaaggacggcaaggtcaagcacgtggccctcggcgtgacaatcaccaccggc
acggtcgaggcggacggcgtgacccgcgccggcgccaaggtcaccgcaggaacctccggc
tccgccgtggtgtccggcagccccgccgacaaggccggcctgaaggtgggcgacgtcatc
gtggcgtacgacggcaacgcggtgagcagcacgtattcgctgctcggctatgtacgtgcg
tcggcgctcaacgacaaggtgacgttgaccatcgtgcgcggcggcaagaccatggacgtc
gaggtgacgctcgacaaggaggagtccgcggtgaacggctccggcagctcgaactcgaac
aacaaccagaacaaccagaacaaccagaatggcaacggccagaacggtaacggcaatggc
aacggcaacaatggcaacagcaacaacggcaacggcaatgacagcaacgggtacggcaac
aacgactacggcaacggcgggttctccgatccgttcggcctgtggtaa
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