KEGG   Bifidobacterium bifidum S17: BBIF_0207
Entry
BBIF_0207         CDS       T01328                                 
Name
(GenBank) possible CRISPR associated protein
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
bbi  Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:bbi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bbi02048]
    BBIF_0207
Prokaryotic defense system [BR:bbi02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    BBIF_0207
SSDB
Motif
Pfam: Cas9_REC Cas9_PI HNH_4 Cas9_RuvC Cas9-BH
Other DBs
NCBI-ProteinID: ADO52412
LinkDB
Position
complement(230746..235008)
AA seq 1420 aa
MSRKNYVDDYAISLDIGNASVGWSAFTPNYRLVRAKGHELIGVRLFDPADTAESRRMART
TRRRYSRRRWRLRLLDALFDQALSEIDPSFLARRKYSWVHPDDENNADCWYGSVLFDSNE
QDKRFYEKYPTIYHLRKALMEDDSQHDIREIYLAIHHMVKYRGNFLVEGTLESSNAFKED
ELLKLLGRITRYEMSEGEQNSDIEQDDENKLVAPANGQLADALCATRGSRSMRVDNALEA
LSAVNDLSREQRAIVKAIFAGLEGNKLDLAKIFVSKEFSSENKKILGIYFNKSDYEEKCV
QIVDSGLLDDEEREFLDRMQGQYNAIALKQLLGRSTSVSDSKCASYDAHRANWNLIKLQL
RTKENEKDINENYGILVGWKIDSGQRKSVRGESAYENMRKKANVFFKKMIETSDLSETDK
NRLIHDIEEDKLFPIQRDSDNGVIPHQLHQNELKQIIKKQGKYYPFLLDAFEKDGKQINK
IEGLLTFRVPYFVGPLVVPEDLQKSDNSENHWMVRKKKGEITPWNFDEMVDKDASGRKFI
ERLVGTDSYLLGEPTLPKNSLLYQEYEVLNELNNVRLSVRTGNHWNDKRRMRLGREEKTL
LCQRLFMKGQTVTKRTAENLLRKEYGRTYELSGLSDESKFTSSLSTYGKMCRIFGEKYVN
EHRDLMEKIVELQTVFEDKETLLHQLRQLEGISEADCALLVNTHYTGWGRLSRKLLTTKA
GECKISDDFAPRKHSIIEIMRAEDRNLMEIITDKQLGFSDWIEQENLGAENGSSLMEVVD
DLRVSPKVKRGIIQSIRLIDDISKAVGKRPSRIFLELADDIQPSGRTISRKSRLQDLYRN
ANLGKEFKGIADELNACSDKDLQDDRLFLYYTQLGKDMYTGEELDLDRLSSAYDIDHIIP
QAVTQNDSIDNRVLVARAENARKTDSFTYMPQIADRMRNFWQILLDNGLISRVKFERLTR
QNEFSEREKERFVQRSLVETRQIMKNVATLMRQRYGNSAAVIGLNAELTKEMHRYLGFSH
KNRDINDYHHAQDALCVGIAGQFAANRGFFADGEVSDGAQNSYNQYLRDYLRGYREKLSA
EDRKQGRAFGFIVGSMRSQDEQKRVNPRTGEVVWSEEDKDYLRKVMNYRKMLVTQKVGDD
FGALYDETRYAATDPKGIKGIPFDGAKQDTSLYGGFSSAKPAYAVLIESKGKTRLVNVTM
QEYSLLGDRPSDDELRKVLAKKKSEYAKANILLRHVPKMQLIRYGGGLMVIKSAGELNNA
QQLWLPYEEYCYFDDLSQGKGSLEKDDLKKLLDSILGSVQCLYPWHRFTEEELADLHVAF
DKLPEDEKKNVITGIVSALHADAKTANLSIVGMTGSWRRMNNKSGYTFSDEDEFIFQSPS
GLFEKRVTVGELKRKAKKEVNSKYRTNEKRLPTLSGASQP
NT seq 4263 nt   +upstreamnt  +downstreamnt
atgagccgcaagaattatgtcgatgattatgcaatttcgttggatatcggaaacgcatcc
gttggctggtcggccttcaccccgaattatcggcttgtacgtgcaaaggggcatgaactc
attggcgtgcgacttttcgatccggctgatacggctgaatctcgccgaatggcacgtacc
acacgcagaaggtactcgcgcaggcgttggcgcctccgtcttcttgatgctttgtttgac
caggcgttgtctgaaattgatccttcatttttggctcgtaggaagtattcttgggtccat
cctgatgatgaaaacaatgcggattgttggtacggtagtgttctgtttgattcaaacgaa
caggacaaacgtttttatgagaaatacccaactatttatcacctgcgcaaagcattaatg
gaagatgactctcagcatgatattagagaaatctatcttgccattcatcatatggtgaaa
tatcgcggtaattttctggttgagggaaccctggaatcgtcgaatgcgttcaaagaagat
gagctgctgaaacttcttggaagaatcacccgttatgaaatgtcggaaggtgagcaaaac
agcgatattgagcaagatgatgagaacaagttggttgcgcctgccaatggccagttagct
gatgctttgtgcgcaacgcgcggctcgcgctccatgcgagtcgataatgcgcttgaagcg
cttagtgctgtaaacgatttgtctcgtgaacaaagagctattgtcaaggctatttttgct
ggacttgaaggtaataaacttgatctcgcgaaaatattcgtcagcaaagagttttcttct
gaaaataagaagatacttggtatttatttcaataagtctgactatgaagagaagtgtgtt
cagattgtagattcgggacttcttgatgatgaggaacgcgaattcttggatcgcatgcag
gggcagtacaacgcaatcgctctgaaacagttgttaggaaggtctacgagtgtttccgat
tcaaaatgcgcaagttatgatgctcatcgcgccaattggaatctaattaaattgcaattg
cgtacgaaagagaatgagaaagacataaacgagaactatggcattctagttggctggaaa
atagatagtggccaacgtaaaagtgtacgtggcgaaagcgcgtatgagaatatgcgaaag
aaagccaatgtctttttcaaaaagatgattgaaacgtctgatctttcggaaacggataaa
aacagactgattcatgatattgaagaagataaactttttccgattcaacgagattcagat
aatggagttattccgcatcagctgcaccaaaatgagctgaaacaaattatcaagaaacag
ggaaagtattatcctttcttgcttgatgcttttgaaaaagacggaaagcagattaataaa
attgaagggttattgactttccgtgtgccctattttgttggtcctttggttgtgcctgaa
gatcttcagaaatctgataatagtgaaaaccattggatggtaagaaagaagaagggtgaa
atcacgccgtggaatttcgatgagatggtcgacaaggacgcctctggtcgaaagttcatt
gaacgattggtgggtactgatagctacttattgggtgagccgacgctgccgaagaactcc
ctgttgtatcaggagtatgaggttctgaatgagctcaacaatgttcgcttgtctgtgcgc
actggaaatcattggaatgataagcgcagaatgcgtcttggccgtgaagaaaaaactctt
ctgtgtcagcgtcttttcatgaaagggcagactgttacaaagaggactgcggaaaatctt
ttgcgcaaagaatatggacgtacatacgagttgtctggcttgtcggatgaatcgaaattt
acgagttcattgtcaacgtatggcaagatgtgtagaatattcggcgagaaatacgtgaat
gagcatcgcgatttgatggaaaagatcgttgagctgcagactgtatttgaagataaagaa
acgctcttgcatcagttgcggcagcttgaaggcatttcggaagcggactgcgctttgctc
gtaaacactcattacactggttgggggcgtttgtctcgcaaattgctgacaacaaaagct
ggtgagtgcaagattagtgatgatttcgcgccgcgtaaacacagcattattgaaattatg
cgtgctgaagaccgtaatttaatggagatcattaccgacaagcaattaggtttttctgat
tggattgagcaagaaaaccttggtgcagaaaacggtagttctcttatggaagtcgttgat
gatttgagggtctcaccaaaggtaaaacgaggaattattcagtcgattcgtttgattgat
gatatttctaaggcagttggcaaacggccgtcaagaattttcttggagttggcggatgat
attcagccaagtggccggacgatatctcgaaagagccgtctacaggatttgtacaggaat
gcgaatctggggaaggaattcaagggaatcgcggacgagcttaatgcgtgcagtgataag
gatcttcaggatgatcgtctgttcctgtactacacgcagcttggaaaagacatgtacacg
ggcgaggaattagatctcgataggctttcatcggcgtatgacattgaccatattattccc
caggcggtgacgcagaacgattcgatcgacaatcgagtgctcgtggcgcgtgctgagaac
gctcgcaagacggattcgttcacgtatatgcctcagatcgcagaccgaatgcgtaatttc
tggcagatacttttagacaatggattaatcagccgcgttaagttcgagcgattgactcgt
caaaacgaattctcggagcgtgagaaagaacgttttgttcagcgttcgctggttgaaaca
aggcagattatgaagaatgtcgcaacgttgatgcgccaacggtatggcaatagcgcggcg
gtcattggtctcaatgcggaattgactaaagaaatgcacagatatttgggattctcgcat
aagaatcgtgacatcaacgattaccatcacgcgcaagatgcgctgtgcgtcggcatcgct
ggacagtttgcggccaatcgtggtttctttgcggatggtgaggtttctgacggtgcacag
aattcttataaccagtatttgcgtgattacctgcgtggatatcgtgagaaactgagcgca
gaagacagaaaacaaggccgtgcgtttggttttattgttggctcgatgcgttctcaagat
gaacaaaagcgagttaatccgcgtactggagaagttgtttggtctgaggaagacaaagat
tatctgcgtaaggtgatgaattatcgtaagatgctcgttacccagaaagtcggagacgat
ttcggggcgctgtacgatgagacaagatatgctgcgactgatccgaaaggaattaagggt
attcctttcgatggtgccaagcaagacacttccctttatggaggtttctccagtgcgaag
cctgcctacgcggttctgattgaatcaaaggggaagacccgcttggtcaatgtaacgatg
caggagtattcgctgctaggggataggccgtctgatgatgagctgcgaaaagtgttggcg
aagaagaagagtgaatatgcgaaagcgaacattctgttacgtcatgtgccgaagatgcag
ttgatccgttatggcggtggactgatggtgattaagtcggctggcgaattgaataatgct
cagcagctttggttgccgtatgaagagtactgttattttgatgatctgtctcaagggaaa
ggttctttggagaaagatgatctgaagaagcttctcgattcgattctgggctctgtacag
tgtctctatccgtggcatagattcaccgaggaggagctcgctgacttgcatgttgctttc
gacaagcttccagaagatgagaagaagaatgtcatcacgggtatagtcagcgcattacat
gcggatgcgaaaacggcaaatctgtcaattgtgggaatgacaggtagctggcgtcgaatg
aataacaaatctggctatacattttccgacgaagatgagttcatcttccagtcgccgtca
ggactttttgaaaagagagtaacggtaggggagttgaaaagaaaggcaaaaaaagaagta
aatagtaagtatcggacaaatgaaaagaggctcccgacattatcgggagcctcacagcca
taa

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