Bifidobacterium bifidum S17: BBIF_0235
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Entry
BBIF_0235 CDS
T01328
Name
(GenBank) helicase
Organism
bbi
Bifidobacterium bifidum S17
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ADO52440
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Position
273248..277267
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AA seq
1339 aa
AA seq
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MDWHASVYGSRSGGGQYRDFSDGDADDDGVTYGARGSYADMADDTAGAAPLPPSVDDAEL
RRLGGNAVYFRAKDVLKSGRMHDMAVSFNVPDSPRTSGTMLTGARANVRLTALVKGADRY
ADDYRVSAAIDTDAGKVGQSSCTCPAYGRFRGVCKHVIALVMAYNEHPDDFAAADDGNGS
TNGIGRGAAGLVPRQPAVRTTRALDLFMRQQDDERTRRSQSRQLDLLKEIGGLADSGGVA
GAAQTARFMPIASVSLRLSLSFSLNSCVAKFRIEVPSRGISYVVKDIASLLQSVKNREFV
AYGKKLAFVHSRDAFDERSRNLLDVLSRAQDIRAVINNDNSAYSYYYRRQSDDATLTLSD
GEVAELLDTYVGTEDTVEYTAPARFYAPTMRVSVVDGNPDLGLAVERGDDPEASNGSTAA
AGYVIRHAQRVERFIEGQRSHYVIARPFSQAESGAGVGSGGRALLSVDRATIYRCDADFA
QKRALLSLLCGENDREAMYLSESDVDRFVRTVLPQLVSRQENEAGRSVNAIGASAGPNAE
DGSAASSVFDRLVPPAGRETGVPAHGGLIIDVPPELLAKMRVPCRLAFYLDRDRAGVTCD
AQAHYGDKHYHVFDGVGVDASMRDKEMERLAVEAMLHYFPRPSGAVAAIPESDDEAIYRL
LTEGLAVLRGLGDVMATPAFDGLTAMPRPTISIGLSVKSGLVEISPIADEIDPDDVPGLL
ASYRRRRRFHRLRNGSFVDMRNVDMSDVDEIADDLGLRTADLESGSITVPAYEAYYLDHQ
VDDDAKDASFTAYLDDLRVIDPSTYRVPAALASVLRPYQAEGFRWLNAVCDKGFGGILAD
EMGLGKSVQLLSLLLARHKESRAERRPNLIVCPASLVYNWVAEVAKHTPELRVEAIAGTK
PERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDYAGLE
FYCMTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLSELWSIFDFLMPGMLGS
YAHFRERFEMPVLSGDETAQKKLQSFVGPFILRRLKSQVLKDLPDKIENVITVQLQGEQR
KLYAALEQQLRSVILRQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG
VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI
AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLTGACVVVHA
DPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASS
ATGRSMAALTKDDLLALLG
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggattggcatgcgtccgtgtatggttcccgctccggcggcggccagtaccgcgacttc
tccgacggtgatgccgacgatgacggcgtcacgtacggcgctcgcggctcgtacgccgac
atggcagacgacactgccggtgccgcgccgctgccgccctccgtcgacgacgccgaactg
cgccggctcggcggcaacgccgtgtattttcgtgcgaaggacgtgctgaaatccgggcgt
atgcacgacatggccgtatcgttcaacgtgccggattcgccacgtacctcgggcaccatg
ctgacgggcgcgcgggccaacgtacgcctgacagcgctggtcaaaggcgccgaccggtac
gcggacgattaccgcgtctccgccgcgatcgacaccgacgcgggcaaggtcggccagtca
tcgtgcacatgccccgcatacggccggttccggggcgtgtgcaaacatgtcatcgcgctg
gtcatggcgtacaacgaacatccggatgacttcgccgcggccgacgacggtaacggctcc
acgaacggtatcggtcgcggagccgcaggcttggttccccggcaacctgccgtgcgcacg
acccgcgcgcttgacctgttcatgcggcagcaggacgacgagcgcacccgcagatcgcag
agccggcagctcgacctgttgaaggaaatcggcggactggctgattccggaggtgtcgcc
ggcgcagcccagacggcgcggttcatgcccatcgccagcgtgtcgctgcggctctccttg
agtttctcgctgaacagctgcgtggcgaaattccgcatcgaagtgccgtcgcgcggcatc
tcctatgtggtcaaggacatcgcctcgctgctgcaatccgtgaaaaaccgcgagttcgtc
gcatacggcaagaagctcgcgttcgtgcactcgcgcgacgcctttgacgagcgctcgcgg
aacctgctcgacgtgctctcccgcgcgcaggacatccgcgccgtcatcaacaacgacaac
agcgcatactcctactattaccggcgtcagtcggatgacgcgacgctgacgttgtcggac
ggtgaggtcgccgaactgctcgatacgtacgtcggcaccgaagacacggtggaatacacg
gctccggcacggttctacgcgccgacgatgcgcgtatcagtcgtggacggcaatcccgat
ctcggccttgcggtggaacgcggcgacgatcccgaggcctcgaacggcagtacggcggcg
gccggttacgtgatacggcatgcgcagcgcgtggaacgattcattgaaggacagcgctcg
cattacgtgatcgcgcggccgttttcccaagccgaatcgggcgcgggcgtggggtcgggc
ggtcgggcgctgctgagcgtcgatcgtgcgacgatataccggtgcgatgccgattttgcg
cagaaacgggcactgctgagcctgctgtgcggtgaaaacgatcgcgaggcgatgtatctg
agcgaaagtgatgtggatcgtttcgtgcgcacggtactgccgcaactggtctcccgccag
gagaacgaggccgggcggtcggtcaacgccattggcgcatccgccggtccgaacgcggag
gacggttccgccgcgtcatcggtctttgaccggctcgtgccgccagctgggcgtgaaacc
ggagttccggcgcacggcggcttgatcatcgacgtgccgcccgagctgctggcgaaaatg
cgcgtgccctgcaggctcgcgttttacctcgaccgcgaccgcgccggggtgacgtgcgac
gcgcaggctcattatggcgacaagcattaccacgtgttcgacggcgtcggcgtcgacgcg
tccatgcgcgacaaggagatggagcgactcgcagtcgaggcgatgctccactatttcccg
cgcccgtccggtgccgtggccgccatccccgagtccgacgacgaggcgatataccgtctg
ctgaccgaaggattggcggtgttgcgcggtttgggcgacgtgatggcgacgcccgcgttc
gacggactgaccgccatgccgcgcccgacgatctccataggcctttcggtgaaatccggg
ctcgtggagatatcgccgatcgccgacgaaatcgacccggacgacgtgccgggcctgctg
gcgagctaccgtcggcgccgcagattccaccggctgcgcaacggctccttcgtcgacatg
cgcaacgtggatatgtccgacgtcgacgagatcgcggatgacctgggactgcggaccgcc
gatctggaatccggctcgatcacggtgcccgcctatgaggcgtactatctggaccatcag
gtcgacgacgacgcgaaggacgcaagcttcaccgcatacctggacgacctgcgcgtgatc
gatccgtccacgtaccgcgttcccgctgcgctggcctccgtgctgaggccgtatcaggcc
gaggggttccgctggctcaatgccgtgtgcgacaagggattcgggggtatcctcgccgac
gagatgggtttgggcaagagcgtgcagctgctgtcgctgctgcttgcgcggcacaaggag
tcccgggccgagcgccgtccgaatctgatcgtctgcccggcctcgctggtgtacaactgg
gtagccgaggtggcgaagcacactcccgagctgcgcgtggaggccatcgccggcaccaaa
ccggaacgtcgcgcgatgcttgacggcgtgcgcgccgcacagcaggacaccggtgtgtct
ccgacgcgggaatccgcaaggccggcatcggccgcggccgcgtccgacgacgttcccgac
gtgctcgtcacctcgtatgacctgctgcggcgcgacatcgacgactatgcgggacttgag
ttctactgcatgacgctcgacgaggcacagtacatcaagaacgccgctaccaaggtgtcg
aaagccgtgcgctccgtcaccgcagtgcatcgtttcgccctgaccggcactccgatcgag
aatcggctgagcgagctgtggagcatcttcgatttcctgatgcccggcatgctcggctcg
tacgcgcatttccgcgaacggttcgagatgccggtgctgagcggcgacgagaccgcacag
aagaaactgcaatcgttcgtggggccgttcatcctgcgccgtcttaagtcgcaggtgctc
aaggatctgcccgacaagatcgagaacgtcatcacagtgcagctgcagggggagcagcgc
aagctgtatgcggcactggagcagcagctgcgctcggtcatcctgaggcagcgtccggcc
gatttcaacaccggcaaaatccagattctggcgcagctgacccgactgcggcaagtatgc
tgcgacccgcggctgatatacgagaacgccgacgggcatgccagtgccttgagcgcaggg
gtgcaatccgccgcgaaagacccacagcagtccgtgaaacagcctgtgaaacagtcgaag
gcgcgcaagaccgtaagctccgcgaaactggacgccatcatcgaactggtggactcctgc
cgtgatgccggccgcaagatgctgatcttctcgcagttcaccagctacctcgacctgatc
gcgcaacggttgcgggccgacggcgtggaatacgacatgatcaccggagcgacgccgaag
aaacgccgtctggagctggtggaccggttcaacgccgacgcgacgccggtgttcctgatc
tcgctcaaggcgggaaacacgggcctgaacctgaccggcgcatgcgtggtcgtgcacgcc
gatccgtggtggaacgcggccgcgcaggatcaggccaccgatcgcgcccaccgcataggc
cagacacaggacgtcaacgtgtatcagatcgtggcgaaggacacgatcgaggagcgcatc
ctcaacctccagcgcagcaagacagacctcgcgcaacggttcgtggattccgcgtcctcc
gccaccggacggtcgatggccgcgctcaccaaggacgacctgctcgccctgctgggctga
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