KEGG   Bifidobacterium bifidum S17: BBIF_0260
Entry
BBIF_0260         CDS       T01328                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bbi  Bifidobacterium bifidum S17
Pathway
bbi00300  Lysine biosynthesis
bbi00470  D-Amino acid metabolism
bbi01100  Metabolic pathways
bbi01110  Biosynthesis of secondary metabolites
bbi01120  Microbial metabolism in diverse environments
bbi01230  Biosynthesis of amino acids
Module
bbi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bbi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BBIF_0260 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BBIF_0260 (lysA)
Enzymes [BR:bbi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BBIF_0260 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ADO52465
LinkDB
Position
303484..305130
AA seq 548 aa
MSERGAMTGSAVRVDGTQGITPIWPVATAVNAEGALTFHGRTAESLLDEFGSPLYLIDTD
EVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIVLA
AGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPARIAAIARRLGKRARVMLRVT
AGIHAGGHEYISTAHEDQKFGVPLLPAGADAAALSVLDELTADPAGVSSAVTNAHIAERD
GDAGDGNAKPERELHYDMKYPYDLSHEEIPEKDKALAAAMETVADGPALAVLKDILTRSD
ELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGE
DSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIKPVHLSDA
KDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDESMLVRVVGMHCESGD
IIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEAGAHVMIRRQTID
DLLDLDQG
NT seq 1647 nt   +upstreamnt  +downstreamnt
ctgagcgaaagaggagcaatgactggatctgctgtgcgtgtggacggaacgcaaggtatc
acccccatctggccggtggcgacggcagtgaatgccgaaggcgccctgacgttccacggg
cgcaccgccgagtcgctgcttgacgagttcggatccccgctgtatctgatcgacactgac
gaagtttccgcccgcgccagatatttcgtgcgcgcggcggccgacgccttcaccaactcc
accacgcacgtgagtttcgccggtaaggcattcctctccaaagaagtcgtgcggttggtg
accgatgcaggcatgctcgtcgacacatgctcgatgggggagatgcgcatcgtgctcgcc
gcaggcgtccccggtcgtcgtctggtgctgcacggcaacaacaagtccgacgcggaaatc
gaactcgccatcgagcagggctttgcgaaaatcgtcgtggacgagccggatgagccggcc
cgcatcgccgccatcgcgcgacgactcggcaagcgtgcccgcgtgatgctgcgcgtgacc
gccggcattcacgccggtggccacgaatacatctccaccgcgcatgaggatcagaagttc
ggcgtgccgctgctgccggccggcgccgatgccgcggcactcagcgtactggacgaactc
acggctgatccagcaggcgtgagttcggctgttacgaacgcgcacatcgccgaacgcgat
ggtgatgccggtgacgggaatgcgaagcccgagcgcgaactgcactacgacatgaagtac
ccgtacgacctgagccacgaggagatccccgaaaaggacaaggcgctcgccgccgcgatg
gaaaccgtggcggatgggccggcactggccgtgctcaaggatatcctcacacggtccgac
gagttggaactcgtcggcattcactctcatatcggttccaacatccatgacgcagacgcc
ttcatccaggccgccaagcgcatgatgctgctgcgcaagaccttctacgccaccgacgcc
tatacgctgcccgaggtcgacttgggcggcggctactccgtggcatacaccgacggcgag
gattcgatggacgtgcgcgtcgagctgcgtcgtctcgccgaagcggtcggtgccatcaac
cgtgcgctcggtgtgcccgcgccggccatcagcttcgagccaggacgatggatcgtcgcc
ccggccggcgtgaccctgtatcgtgtgggcacgatcaagccggtgcatctgtccgacgcc
aaagacaagaccggcaatcccatcgatgagcgcgtgtacgtgtcggtggacggcggcatg
agcgacaatattcgtccagcgctgtacggcgccgactacacggtccggctggccaaccgt
cgcgggtcggacgagtcgatgctggtgcgcgtagtcggcatgcattgcgagtccggcgac
atcatcgtgcacgaggacaggcttccggccgacctcaggcgcggcgacatcctcgccgtg
ccggtgacgggcgcatacggccgcacgatggcgagcaactacaatcaggcgctgattcct
gccgtggtcgccgtgagtgaagccggcgcacatgtgatgatccgtcgccagaccattgac
gacctgctggatctggatcagggctga

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