Bifidobacterium bifidum S17: BBIF_0260
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Entry
BBIF_0260 CDS
T01328
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00300
Lysine biosynthesis
bbi00470
D-Amino acid metabolism
bbi01100
Metabolic pathways
bbi01110
Biosynthesis of secondary metabolites
bbi01120
Microbial metabolism in diverse environments
bbi01230
Biosynthesis of amino acids
Module
bbi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBIF_0260 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBIF_0260 (lysA)
Enzymes [BR:
bbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBIF_0260 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADO52465
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Position
303484..305130
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AA seq
548 aa
AA seq
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MSERGAMTGSAVRVDGTQGITPIWPVATAVNAEGALTFHGRTAESLLDEFGSPLYLIDTD
EVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIVLA
AGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPARIAAIARRLGKRARVMLRVT
AGIHAGGHEYISTAHEDQKFGVPLLPAGADAAALSVLDELTADPAGVSSAVTNAHIAERD
GDAGDGNAKPERELHYDMKYPYDLSHEEIPEKDKALAAAMETVADGPALAVLKDILTRSD
ELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGE
DSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIKPVHLSDA
KDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDESMLVRVVGMHCESGD
IIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEAGAHVMIRRQTID
DLLDLDQG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ctgagcgaaagaggagcaatgactggatctgctgtgcgtgtggacggaacgcaaggtatc
acccccatctggccggtggcgacggcagtgaatgccgaaggcgccctgacgttccacggg
cgcaccgccgagtcgctgcttgacgagttcggatccccgctgtatctgatcgacactgac
gaagtttccgcccgcgccagatatttcgtgcgcgcggcggccgacgccttcaccaactcc
accacgcacgtgagtttcgccggtaaggcattcctctccaaagaagtcgtgcggttggtg
accgatgcaggcatgctcgtcgacacatgctcgatgggggagatgcgcatcgtgctcgcc
gcaggcgtccccggtcgtcgtctggtgctgcacggcaacaacaagtccgacgcggaaatc
gaactcgccatcgagcagggctttgcgaaaatcgtcgtggacgagccggatgagccggcc
cgcatcgccgccatcgcgcgacgactcggcaagcgtgcccgcgtgatgctgcgcgtgacc
gccggcattcacgccggtggccacgaatacatctccaccgcgcatgaggatcagaagttc
ggcgtgccgctgctgccggccggcgccgatgccgcggcactcagcgtactggacgaactc
acggctgatccagcaggcgtgagttcggctgttacgaacgcgcacatcgccgaacgcgat
ggtgatgccggtgacgggaatgcgaagcccgagcgcgaactgcactacgacatgaagtac
ccgtacgacctgagccacgaggagatccccgaaaaggacaaggcgctcgccgccgcgatg
gaaaccgtggcggatgggccggcactggccgtgctcaaggatatcctcacacggtccgac
gagttggaactcgtcggcattcactctcatatcggttccaacatccatgacgcagacgcc
ttcatccaggccgccaagcgcatgatgctgctgcgcaagaccttctacgccaccgacgcc
tatacgctgcccgaggtcgacttgggcggcggctactccgtggcatacaccgacggcgag
gattcgatggacgtgcgcgtcgagctgcgtcgtctcgccgaagcggtcggtgccatcaac
cgtgcgctcggtgtgcccgcgccggccatcagcttcgagccaggacgatggatcgtcgcc
ccggccggcgtgaccctgtatcgtgtgggcacgatcaagccggtgcatctgtccgacgcc
aaagacaagaccggcaatcccatcgatgagcgcgtgtacgtgtcggtggacggcggcatg
agcgacaatattcgtccagcgctgtacggcgccgactacacggtccggctggccaaccgt
cgcgggtcggacgagtcgatgctggtgcgcgtagtcggcatgcattgcgagtccggcgac
atcatcgtgcacgaggacaggcttccggccgacctcaggcgcggcgacatcctcgccgtg
ccggtgacgggcgcatacggccgcacgatggcgagcaactacaatcaggcgctgattcct
gccgtggtcgccgtgagtgaagccggcgcacatgtgatgatccgtcgccagaccattgac
gacctgctggatctggatcagggctga
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