Bifidobacterium bifidum S17: BBIF_0345
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Entry
BBIF_0345 CDS
T01328
Symbol
ffh
Name
(GenBank) Signal recognition particle, subunit FFH/SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi02024
Quorum sensing
bbi03060
Protein export
bbi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BBIF_0345 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BBIF_0345 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBIF_0345 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bbi02044
]
BBIF_0345 (ffh)
Enzymes [BR:
bbi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BBIF_0345 (ffh)
Secretion system [BR:
bbi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BBIF_0345 (ffh)
Eukaryotic Sec-SRP protein
BBIF_0345 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
MeaB
AAA_31
AAA_22
ArsA_ATPase
cobW
Zeta_toxin
AAA_24
APS_kinase
AAA_18
AAA_33
WH_MCM3_C
Motif
Other DBs
NCBI-ProteinID:
ADO52550
LinkDB
All DBs
Position
complement(409344..410990)
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AA seq
548 aa
AA seq
DB search
MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTARIRER
ALGTEVSEALNPAQQVVKIVNEELTDVLGQGVDRPLNFAKNPPTIIMLAGLQGAGKTTLA
GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGEHAGVPVYAPEKGVQSDGGDSVSAPG
ETSGDPVKVARDSIALAKQKLYDTVIIDTAGRLGVDEVLMQQARDIRDAVNPNEILFVID
AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF
EVFHPDRMASRILDMGDILTLIEQAQKQFDEEEARKAAQKMAEGEFGLDDFMDQLQQVRK
LGSMKSLLGMIPGMAQHRKELEQFDEKEIDRTEAIIRSMTPEERRNPKIIDGSRRARIAY
GSGVTVSAVNGLLQRFEQAAKMMKRMSNKAMGGIPGFGGPAVGGGKKGKGKSKKKGSKSG
NPMKREAEEKALRDKLAGKGSGSGKSGGSAFMKKPQNPALPAGLQDALDANGGELPPNFG
GGLSGLLG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttagttctttgacagaccggctctcgaatgcgttcaagcatctgaagagc
aagggcaaactttccgaggcggatatcgacggcacgatccgtgagatccgccgcgcgctg
ctcgacgccgatgtggcgctcgacgtggtgcgttccttcaccgcgcgcatccgcgaacgt
gcgctcggcaccgaagtgtccgaagcgctcaacccggcgcagcaggtggtcaagatcgtc
aacgaggagctgacggatgtgctcggccagggcgtggaccggccgctgaacttcgccaag
aacccgccgacgatcatcatgctggccggcctgcagggcgccggcaagacgacgctcgcc
ggcaaactcggctactggctgaaggattccggccacacgccgctgctggtcgccgccgac
ttgcagcgtccgaacgccgtgacccagctgcaggtggtcggtgaacacgccggcgtgccg
gtgtacgcgcccgagaagggcgtccagtccgacgggggcgactcggtgtccgcgccgggc
gagacctccggcgacccggtaaaggtggcccgcgattcgatcgcgctggccaagcagaag
ctgtacgacacggtcatcatcgataccgccggccgactgggcgtcgacgaagtgctgatg
cagcaggcccgcgacatccgcgatgccgtgaaccccaacgagatcctgttcgtcatcgac
gcaatgatcggccaagacgccgtccagacggccaaggcgttcgacgagggcgtggatttc
accggcgtggtgctgtccaagctcgacggcgacgcccgcggcggtgcggcgctgtcggtg
gcgagcgtgaccggcaagccgatcctgttcgcctcgaccggcgaagggctcaaggacttc
gaggtcttccaccccgatcgcatggcctcgcgcatcctcgacatgggcgatatcctcacc
ctgatcgaacaggcgcagaagcagttcgacgaggaggaggcccgcaaggccgcccagaag
atggcggaaggcgagttcggactcgacgacttcatggaccagctgcagcaggtgcgcaag
ctcggctcgatgaagtcgctgctcggcatgatccccggcatggcgcagcaccgcaaggaa
ctggagcagttcgacgagaaggagatcgaccgcaccgaagcgatcatccggtcgatgacc
cccgaagagcggcgcaacccgaagatcatcgacggctctcgccgcgcccgcatcgcctat
ggttccggcgtaaccgtctcggcggtcaacgggctgctgcaacggttcgagcaggccgcg
aagatgatgaagcgcatgagcaacaaggccatgggcggcatccccggtttcggaggcccc
gcggtaggcggcggcaagaagggcaagggcaagagcaagaagaagggctcgaagtccggc
aatccgatgaagcgcgaggccgaggagaaggcgttgcgcgacaagctcgccggcaagggc
tccggttccggcaagtccggcgggtccgccttcatgaagaagccgcagaatccggctctt
ccggccgggctgcaggatgcgctcgacgcgaacggtggagagcttccgcccaacttcggc
ggcggcctttccggtctgctcggctga
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