Bifidobacterium bifidum S17: BBIF_0355
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Entry
BBIF_0355 CDS
T01328
Symbol
rncS
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BBIF_0355 (rncS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbi03019
]
BBIF_0355 (rncS)
03009 Ribosome biogenesis [BR:
bbi03009
]
BBIF_0355 (rncS)
03036 Chromosome and associated proteins [BR:
bbi03036
]
BBIF_0355 (rncS)
Enzymes [BR:
bbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BBIF_0355 (rncS)
Messenger RNA biogenesis [BR:
bbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBIF_0355 (rncS)
Ribosome biogenesis [BR:
bbi03009
]
Eukaryotic type
90S particles
RNase
BBIF_0355 (rncS)
Prokaryotic type
rRNA processing factors
BBIF_0355 (rncS)
Chromosome and associated proteins [BR:
bbi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BBIF_0355 (rncS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ADO52560
LinkDB
All DBs
Position
420372..421139
Genome browser
AA seq
255 aa
AA seq
DB search
MTEPEPREELFSALGVTISPDLLIQALTHRSFSHEHPGTSNYERLEFLGDAVLELVSTET
LFTLHPDMTEGQLAKMRAKAVSEEALSAIARDKLHVGPFILLGHGEAESGGAEKSSILCD
IVESLIGATFLEHGIEGARKVVHRLIDDTLAEVATEGPALDWKTSLTVKAHELGLDEPRY
RMSVSGPEYAQEFTAKATIGPKDDIIGKGTGTSKRKAQLAAAEMAWHELDRYAPALKAAR
KNGSSKHRRSGSAGN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctgaaccgcgcgaagagctgttctccgcgctgggcgtcaccatcagcccg
gatctgctgatacaggcgctcacccatcgttcgttctcgcacgaacaccccggcacatcg
aactatgagcggctggaattcctcggcgacgccgtgctggaactggtatcgaccgagacg
ctgttcacgctgcatcccgacatgaccgaaggccagctggcgaagatgcgcgccaaggcc
gtttcggaggaggccctgtcggcgatcgcccgggacaagttgcacgtcggaccgttcatc
ctgctcgggcacggcgaggcggagtccggcggtgccgagaaaagctccattctgtgcgac
atcgtcgaatcgctgatcggcgccacgttcctggagcacggcatcgaaggcgcgcgcaag
gtcgtgcaccggctcatcgacgacacgttggcggaagtggccaccgaaggaccagccctg
gactggaagacctcgctgaccgtgaaggcgcacgagctcggcctggatgagccgcggtac
cgcatgagcgtgtccggccccgaatacgcgcaggaattcaccgccaaggccaccatcggc
ccgaaagacgacatcatcggcaagggtaccggcaccagcaagcgcaaggcgcagctcgcc
gcggcggaaatggcctggcatgagctcgaccggtacgcgcccgcgctcaaggcggcccgc
aagaacggctcgtccaagcaccggcgcagcggctcggccggcaactga
DBGET
integrated database retrieval system