KEGG   Bifidobacterium bifidum S17: BBIF_0355
Entry
BBIF_0355         CDS       T01328                                 
Symbol
rncS
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
bbi  Bifidobacterium bifidum S17
Pathway
bbi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bbi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BBIF_0355 (rncS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbi03019]
    BBIF_0355 (rncS)
   03009 Ribosome biogenesis [BR:bbi03009]
    BBIF_0355 (rncS)
   03036 Chromosome and associated proteins [BR:bbi03036]
    BBIF_0355 (rncS)
Enzymes [BR:bbi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BBIF_0355 (rncS)
Messenger RNA biogenesis [BR:bbi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BBIF_0355 (rncS)
Ribosome biogenesis [BR:bbi03009]
 Eukaryotic type
  90S particles
   RNase
    BBIF_0355 (rncS)
 Prokaryotic type
  rRNA processing factors
   BBIF_0355 (rncS)
Chromosome and associated proteins [BR:bbi03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BBIF_0355 (rncS)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: ADO52560
LinkDB
Position
420372..421139
AA seq 255 aa
MTEPEPREELFSALGVTISPDLLIQALTHRSFSHEHPGTSNYERLEFLGDAVLELVSTET
LFTLHPDMTEGQLAKMRAKAVSEEALSAIARDKLHVGPFILLGHGEAESGGAEKSSILCD
IVESLIGATFLEHGIEGARKVVHRLIDDTLAEVATEGPALDWKTSLTVKAHELGLDEPRY
RMSVSGPEYAQEFTAKATIGPKDDIIGKGTGTSKRKAQLAAAEMAWHELDRYAPALKAAR
KNGSSKHRRSGSAGN
NT seq 768 nt   +upstreamnt  +downstreamnt
atgactgaacctgaaccgcgcgaagagctgttctccgcgctgggcgtcaccatcagcccg
gatctgctgatacaggcgctcacccatcgttcgttctcgcacgaacaccccggcacatcg
aactatgagcggctggaattcctcggcgacgccgtgctggaactggtatcgaccgagacg
ctgttcacgctgcatcccgacatgaccgaaggccagctggcgaagatgcgcgccaaggcc
gtttcggaggaggccctgtcggcgatcgcccgggacaagttgcacgtcggaccgttcatc
ctgctcgggcacggcgaggcggagtccggcggtgccgagaaaagctccattctgtgcgac
atcgtcgaatcgctgatcggcgccacgttcctggagcacggcatcgaaggcgcgcgcaag
gtcgtgcaccggctcatcgacgacacgttggcggaagtggccaccgaaggaccagccctg
gactggaagacctcgctgaccgtgaaggcgcacgagctcggcctggatgagccgcggtac
cgcatgagcgtgtccggccccgaatacgcgcaggaattcaccgccaaggccaccatcggc
ccgaaagacgacatcatcggcaagggtaccggcaccagcaagcgcaaggcgcagctcgcc
gcggcggaaatggcctggcatgagctcgaccggtacgcgcccgcgctcaaggcggcccgc
aagaacggctcgtccaagcaccggcgcagcggctcggccggcaactga

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