Bifidobacterium bifidum S17: BBIF_0387
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Entry
BBIF_0387 CDS
T01328
Name
(GenBank) Transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbi03000
]
BBIF_0387
Transcription factors [BR:
bbi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BBIF_0387
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GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_4
Peripla_BP_1
HTH_31
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ADO52592
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Position
460513..461688
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AA seq
391 aa
AA seq
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MTTSAKTITIGGVSSTSKVDAMGKTENGKTGKSEIAQNLPGSPTTAARRRVTLRDVATAA
GVSLKTASNVINGTGRMTDATRAKVEAVIEQTGYRVNVAARNLNRDRTGFITLAVPTLTA
PYLSELANRVIDAARQRGYLVYVTTYAEGSATGARELLRNFNTTVSDGMILSMSEVEDIS
PEDLEVDFPLVVVGARTTWGKADHVTPNDVQAAASAAGYMFDCGVKSLAVVGGRGAYDEA
KLLGAVEGNAQLRLRGIIEECRRRGVTLDSRLVGNVEQEWTIGAGAHATQELIDKGVPFD
GVIGLNDQLAIGALTVMRANGIEIPRQVQVIGFDNIEESQYLQIPLTTMDSRLEWTAPTA
VERILGRIRGEIAKPELLMTDCDVIVRDSTR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcggcgaagacgattaccatagggggagtttcctctacgagtaaggttgac
gcgatgggcaagaccgaaaacggcaagaccggcaagagcgagatcgcgcagaacctgcca
ggctcgccgacgacggccgcacgtcggcgcgtcacgttgcgcgacgtcgccaccgcggcc
ggcgtgtcgctgaaaacggcatccaatgtcatcaacggcaccggacgcatgaccgacgcc
acccgcgccaaagtcgaagccgtcatcgagcagaccggataccgggtcaacgtcgccgcg
cgcaacctcaaccgggaccgcaccggcttcatcacgctcgctgtgccgacgctgaccgcg
ccatacctgtccgagctcgcgaaccgcgtgatcgacgccgcccggcagcgcggatacctc
gtgtacgtcaccacatacgcggaagggtcggcgacgggcgcccgtgagctgttgcgcaac
ttcaacaccacggtgtcggacggcatgattctgtcgatgagcgaggtcgaggacatcagc
ccggaggacctggaggtcgatttcccgctggtggtggtcggcgcgcgaaccacatggggc
aaggccgatcatgtgacgcccaacgacgtgcaggcggcggcatcggccgccggatacatg
ttcgactgcggcgtgaagtcgctggcggtggtcggcggacgtggcgcatatgacgaggcg
aagctgctcggcgcggtggaaggcaacgcgcagctgcgtttgcgcggcatcatcgaagaa
tgccggcgacgcggcgtgacgctggactcgcggctggtcggcaatgtcgagcaggaatgg
acgattggcgcgggcgcccatgccacgcaggagctcatcgacaagggcgtgccgttcgac
ggcgtcatcggcctgaacgaccagctggccatcggcgcgttgaccgtgatgcgcgcgaac
ggcatcgagattccccggcaggttcaggtgatcgggttcgacaacatcgaggagtcgcaa
tacctgcagattccgctcaccaccatggattcgcgtctggagtggaccgcgcctaccgcc
gtcgagcggattctcgggcgcatccgcggtgagatcgctaagcccgagttgttgatgacc
gattgcgacgtgattgtgcgcgacagcacgcggtga
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