Bifidobacterium bifidum S17: BBIF_0658
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Entry
BBIF_0658 CDS
T01328
Symbol
pafA
Name
(GenBank) proteasome accessory factor A
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bbi03051
]
BBIF_0658 (pafA)
Enzymes [BR:
bbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
BBIF_0658 (pafA)
Proteasome [BR:
bbi03051
]
Prokaryotic proteasome
Bacterial regulatory particles
BBIF_0658 (pafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pup_ligase
DUF3305
Motif
Other DBs
NCBI-ProteinID:
ADO52863
LinkDB
All DBs
Position
806612..808069
Genome browser
AA seq
485 aa
AA seq
DB search
MPQLRDSGNHGSWQEARRSSQFQGFARIFGVETEYGVSVTGSDHPVDATQVAMMMFQPVV
SRARSTNTYLTNGSRLYLDVGSHPEYATAEARDPMDALLQDLAGERVMAGLALDAQARLR
ARYGDGVNVHVFKNNADSAGHSFGCHENYLVRRYVPLETVEHELLPFLITRQLYTGAGRV
TDQGFEITQRADYLDEAVSSATTRSRPMVNTRDEPHSDPDEFRRLHVIIGDSNRSQWATW
MKLAVTHLIICVIEEAARLGEDSGFASCALADPGAANRAVSADLTCVTARLRLADGSEPV
SAVQMQRRYQAVVRDFMERHHDAVDDALPRTDVDQILSAWSLVLDQLEAGDVEALSDRVD
WAAKYRLFQALKRRKGEVTDAMRERLDMDYHDIVNGSLYPSMLRRGVMRQLATPRQVEHA
VSEPPADTRAALRGAFVAKALSTQCRFSCDWTRLSVMAPERSEVVLLDPFEYQANADVQH
LMNLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgcgtgacagcggcaatcacgggagttggcaggaagcgcggaggtcttcg
cagttccagggattcgcccgcattttcggcgtggagacggagtacggcgtatcggtgacg
ggttcggaccatccggtcgacgcgacgcaggtcgcgatgatgatgttccagcctgtcgtg
tcccgcgcgcgttccacgaacacgtacctgaccaatggttcgcggctgtatctcgacgtc
ggctcccacccggagtatgcgaccgccgaggcccgcgatccgatggacgccttgctgcag
gatctggcgggggagcgggtcatggccggattggccctcgacgcgcaggcccggcttcgt
gccaggtacggggacggcgtgaacgtgcacgtgttcaagaacaacgcggactcggcgggc
cactcgttcgggtgtcacgagaactatctcgtacgccgatatgtgcctctggaaaccgtc
gaacacgagctgctgccgttcctgataacgaggcagctgtacaccggagccgggcgggtc
accgatcagggattcgagatcacgcagcgggcggactatctggatgaggcggtgtcatcg
gcgacgacgcggtcgcgccccatggtcaacacacgtgacgaaccgcactcggatccggat
gaattccgccggctgcatgtcatcatcggcgactccaatcgttcgcaatgggcgacatgg
atgaaactcgccgtgacgcatctgattatctgcgtcatcgaggaggccgcccggctcggt
gaggattccggtttcgcgtcgtgcgcgttggctgatcccggtgccgcgaaccgtgcggtc
agcgccgatctgacatgcgtgaccgcccggcttcgtcttgctgacggctccgagccggtg
tccgccgtgcagatgcagcgcaggtaccaggccgtcgtccgtgatttcatggaacgtcat
catgatgccgttgacgacgcactgccgcgcacggacgtggatcagattctttccgcatgg
tcgctggttcttgaccagttggaggccggcgatgtggaagcgttgtcggaccgcgtcgac
tgggcggcgaaataccgcctgttccaggcgctgaaacgccgcaagggcgaagtgacggac
gccatgcgcgaacggctggacatggattaccatgacatcgtcaacggttcgctgtatccg
tcaatgctgcgtcgaggcgtgatgcggcagctggccacgccccggcaggtggagcatgcc
gtctcggaaccgccggccgatacccgtgccgcgttgcgtggggccttcgtcgccaaggcg
ctgtccacgcaatgccggttctcctgcgactggacgcgattgtccgtcatggctcccgaa
cgcagcgaagtcgtgctgctggaccctttcgaataccaggcgaatgccgacgtccaacac
ctgatgaacctgctataa
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