Bifidobacterium bifidum S17: BBIF_0987
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Entry
BBIF_0987 CDS
T01328
Symbol
uvrA2
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBIF_0987 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbi03400
]
BBIF_0987 (uvrA2)
DNA repair and recombination proteins [BR:
bbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBIF_0987 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBIF_0987 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_21
RsgA_GTPase
AAA_23
AAA_33
nSTAND3
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
AAA_24
T2SSE
Viral_helicase1
cobW
FtsK_SpoIIIE
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Septin
Cytochrome_C7
Motif
Other DBs
NCBI-ProteinID:
ADO53192
LinkDB
All DBs
Position
complement(1186822..1189812)
Genome browser
AA seq
996 aa
AA seq
DB search
MTGRKTSKSGGGDVVIERVMSSDTFLSREIRKAPMRKTDSSLVADISHIPNDLKITIQGA
REHNLKNVDLAVPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMD
KPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGVPHCPECGELVSA
QTPQQMVDTLLKNPERTRFQILAPVVRGRKGEFADLLELLRGDGYARALIDGEGRQLSDD
IKLTKQKKHTIEVVVDRLMIRDGIRQRLTDSIETALRLSKGVIVADFVDLDEKDPNRRQP
FSEHRACPNGHQLQLDEIEPRTFSFNAPYGACPVCDGIGYKLEIDPDLVIADDSKSLSDG
VIEPWGGGKTTTEYYGHVLQGLADELGFSMDTPWRDLPEDVRHSILYGHDFKVNVSYRNR
WGRLREYSTGFEGVVRTLMRRYHETDSDQMKQYYESYMREVPCQACNGRRLRPEVLAVTV
DGESIADVCDMPVERGLAWINGLKLEGAAATIAGEVVKEIRARLGFLNDVGLNYLTLSRA
AKTLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNARLIETLHHLRDLGNTLIV
VEHDQETIERADWVVDIGPGAGEHGGEVIYSGPAKRLIEAPRSVTGDYIAGRRSIEVPAV
RRKPHATKRLRVVGARENNLKNITVDFPLGVMTVVTGVSGSGKSTLVNTILYPVLADKLN
GARIVPGKHTRVEGLDQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVR
GYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVECEECHGKRYNRETLEVKYNGKT
VADVLDMPIEEAATFFKAYPSISRYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLATEL
QRRSTGKTVYILDEPTTGLHFEDVRKLLLVLQGLVDKGNTVIVIEHNLDVVKSADWIIDL
GPEGGDGGGTIVTQGTPEQVAQCEASWTGKFLKDML
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
gtgactggacgcaagacgtcgaaatcgggcggcggggacgtcgtgatcgaacgtgtgatg
agcagcgacacgttcctgtcgcgcgagatccgcaaggcaccgatgcgcaagaccgactcc
tcattggtggcggacatctcacatatcccgaacgatctgaagatcaccatccagggtgcg
cgtgaacacaatctgaagaacgtggatctcgccgtgccgcgcaacaggatggtcgtgttc
accggactgtccggctccggcaagtcatcgctcgcgttcgatacgctgttcgcggagggg
cagcgccggtatgtggagtcgttgtccgcgtatgcgcgtcagttcctcgggcaaatggac
aagccggatgtggatttcatcgagggattgagccctgcggtgtcgatcgaccagaagacc
acaaaccgcaatccgcgttcgaccgtgggcacgatcaccgagatttatgattatctgcga
ctgctgttcgcccgcacaggcgtaccgcattgccccgaatgcggcgagctggtcagcgcg
cagacccctcagcagatggtggacacgctgctgaagaacccggaacgcacgagattccag
attctcgcgcccgttgtacgcggccgcaagggggagttcgccgatcttctggagctgctg
cgcggcgacggctatgcccgcgcgctgatcgacggtgaggggcgccagctgtccgacgac
atcaagctcaccaagcagaaaaagcacaccatcgaggtcgtggtggatcgtctgatgatc
cgcgacggcatccgacagcggcttactgattcgatcgagaccgcgctgcggttgtccaaa
ggtgtcatcgtcgccgatttcgtggacttggacgagaaggacccgaatcggcgtcagccg
ttctcggagcacagggcctgtccgaacgggcatcagctgcagttggacgagatcgagccc
cgcacgttctcgttcaatgcgccatacggggcctgccctgtgtgcgatggcatcggctac
aagctggagatcgaccccgatctggtcatcgccgatgattccaagtcgctgtccgacggc
gtgatcgagccgtggggaggcggcaagaccacgaccgaatactacgggcatgtgctgcag
ggcctggccgacgaactcgggttctccatggacaccccatggcgtgatttgcctgaggac
gtgcggcattcgatcctgtacgggcatgatttcaaggtcaacgtctcatatcgcaaccgg
tgggggcggctgcgcgagtattcgaccggattcgagggtgtcgtgcgcacgctgatgcgc
cggtatcacgagaccgactcggaccagatgaagcagtactacgagtcgtacatgcgcgag
gttccctgccaggcgtgcaatggcaggaggctgcgccccgaagtgttggcggtcaccgta
gacggcgaatccatcgccgatgtatgcgacatgcccgtcgaacgcgggctagcgtggatc
aatgggctgaaactggagggagcggcggcgacgatcgccggcgaagtggtcaaggagatc
cgggcccggctgggattcctcaacgatgtcggcctgaactacctgacgctgtcgcgcgcg
gccaagacgctgtccggcggcgaggcccagcgcatcaggcttgccacgcagatcggctcc
ggactggtcggcgtcatgtacgtgctcgacgagccatcgatcggactgcaccagcgtgac
aacgcgcgtctcatcgagacgctgcaccatctgcgcgacctcggcaacacgctgattgtc
gtcgaacacgatcaggaaaccatcgagagggcggattgggtggtcgacatcggccccggt
gccggcgagcacggcggcgaggtgatttactccggtccggcgaagcgcctcatcgaggcg
ccccggtccgtcaccggcgattacatcgccggccgacggagcatcgaggtgccggccgtg
cggcgcaagccgcatgccacgaagcgccttcgcgtggtgggggcaagggagaacaatctg
aagaacatcaccgtcgatttcccccttggcgtgatgactgtggtcaccggcgtctccggc
tccggcaaatcgaccctggtgaacacgatcctctacccggtgctcgccgacaagctcaac
ggcgcgcgcatcgtgccgggcaagcacacgcgcgtcgagggccttgaccagtgcgacaag
gtcatccacgtcgaccagaacccgatcgggcgcactccgcgctcgaacccggccacatac
accggcgtgtgggacaagatccgcacgctgttcgctaagacgccggaggcgcaggtgcgc
ggttacggtccggggcggttctcgttcaacgtcaagggcggccgctgcgaggcgtgccac
ggcgacggcacgctcaagatcgagatgaacttcctgcccgacgtgtacgtcgaatgcgag
gaatgccacggcaagcggtacaaccgcgaaaccctggaggtcaaatacaacggcaagacc
gtcgccgacgtgcttgatatgccgatcgaggaggccgccacgttcttcaaggcgtacccg
tcgatctcccgctacctcgacacgctcgtgcaggtcggactggggtatattcgcctcggg
cagcccgcgcccacgctgtccggcggagagtcgcagcgcgtcaagctcgccaccgagctg
cagcgcaggtccaccggcaagacagtgtatatcctcgacgaaccgaccacgggcctgcac
ttcgaggacgtgcgcaaactgctgctcgtgctgcagggactggtagacaaaggcaatacc
gtgatcgtcatcgagcacaatctcgacgtggtcaagtccgccgactggatcatcgatttg
ggcccggaaggaggcgacggcggcggcacgattgtcacgcagggcacacccgaacaggtg
gcgcaatgcgaagcgtcctggacgggcaagttcctcaaggacatgctgtga
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integrated database retrieval system
