Bifidobacterium bifidum S17: BBIF_1015
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Entry
BBIF_1015 CDS
T01328
Symbol
fadD4
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00061
Fatty acid biosynthesis
bbi00071
Fatty acid degradation
bbi01100
Metabolic pathways
bbi01212
Fatty acid metabolism
bbi02024
Quorum sensing
bbi04146
Peroxisome
Module
bbi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BBIF_1015 (fadD4)
00071 Fatty acid degradation
BBIF_1015 (fadD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BBIF_1015 (fadD4)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBIF_1015 (fadD4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bbi01004
]
BBIF_1015 (fadD4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbi04147
]
BBIF_1015 (fadD4)
Enzymes [BR:
bbi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BBIF_1015 (fadD4)
Lipid biosynthesis proteins [BR:
bbi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BBIF_1015 (fadD4)
Exosome [BR:
bbi04147
]
Exosomal proteins
Exosomal proteins of breast milk
BBIF_1015 (fadD4)
Exosomal proteins of breast cancer cells
BBIF_1015 (fadD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADO53220
LinkDB
All DBs
Position
complement(1219716..1221791)
Genome browser
AA seq
691 aa
AA seq
DB search
MFRMAACRYAAMLIVEPMLREYTVDTIYQTTDLDTIYSLLAKRCERDPDDLVAQWQDDET
RQWHDVSAGQMNDRVREVAKGLLGLGVKPGSMVVIYAATCYEWGVVDFACASIGAVSVPV
YETDSPKQTGDIVAEVEPVIAFAGDDSHAQILEQIRAHSESLRYVFNFKANGLDAVADFG
ESVSDEELDKAIGRVRADDLFTIVYTSGSTGKPKGVMLSHRNFNHTVYNGYEVLNDMLYQ
PSRLLLFLPLAHCFARYIQYVAIGSHGVVGYISSAKRLLADLRGFKPTYLLGVPRVFEKV
YNAASQKAGAGLKGRLFAKAFDHFVQWSKDEMAGGHHSLGARIQHSFYMQTVGSSIRSAL
GPNMKWLACGGAPLNADLAHFFNGFDGITFIQGYGMTETAAPCLVNFQDANEVGSVGRPG
CISIRLADDDELMIKGANVFLGYYKQPQRTAEALTSDGWLHTGDLATIDDRGFVFITGRK
KDIIITAGGKNISPAPMEDVINTCPIVAHAVVIGDGRPFIAALIELDAEMTRSWLASQNL
DIDAPMSEIATNDAVRALVQQYIDKANGNVSRAESVRKFVILDEEFNQEDGTLTPSMKVV
RPKVLQRYADVIDNMIYAPKNAAKPLPATVKILDMTAETVKQSSESVKQAFDQAKGKIRF
MKDDEAKSGSPEQEDSVGDAASDGNDTSEEK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcatggccgcgtgccggtacgcggccatgcttatagtggagcctatgttgcgt
gaatacaccgtcgatacgatctatcagaccacagacctggacaccatctattcactgctc
gccaagcgttgcgaacgcgaccccgatgacctcgtcgcccaatggcaggacgatgagacg
aggcagtggcatgacgtgtccgccggccagatgaacgaccgcgtccgtgaggtggccaag
gggcttctcggcctcggggtcaagcccggcagcatggtcgtgatatacgccgccacctgc
tatgagtggggcgtcgtggacttcgcctgcgcctccatcggcgcggtgagcgtccccgta
tacgagaccgattcgcccaaacagacgggtgatatcgtcgcagaggtcgaaccggtcatc
gccttcgccggcgacgactcccatgcgcagatccttgagcagattcgcgcgcacagcgag
agcctgcgctacgtgttcaacttcaaggcgaacggcctcgacgcggtcgccgatttcggc
gagtccgtcagcgacgaggaactggacaaggcgatcggccgcgtccgcgccgacgacctg
ttcaccatcgtgtacacgtcgggctccaccggcaaaccgaagggcgtgatgctgtctcac
cgcaacttcaaccacacggtctacaacggctatgaggtactcaacgacatgctgtaccag
ccgagccgtctgctgctgttccttccgctggcgcactgcttcgcgcggtacatccagtac
gtggccatcggctcgcatggcgtggtcggctatatctccagcgccaagcggctgctcgcc
gacctgcgcggcttcaagcccacgtatctgctgggcgtgccccgcgtgttcgagaaggtg
tacaacgccgcctcgcagaaggccggagccggtctcaaggggcgcctgttcgccaaggcg
ttcgatcatttcgtgcagtggtcgaaggacgagatggccggcggccatcattccctgggc
gcccgcatccagcacagcttctacatgcagaccgtgggctcgtcgatccgttccgccctg
ggccccaacatgaagtggctcgcctgcggcggcgccccgctcaatgccgatctcgcgcac
ttcttcaacggattcgatggtatcaccttcatccaggggtatggcatgaccgagacggcc
gcgccctgcctggtgaatttccaggacgcgaacgaggtcggctccgtcggccggcccggc
tgcatctccatcaggctcgcggatgacgacgagctgatgatcaagggggcgaacgtgttc
cttggctactacaagcagcctcagcggaccgccgaggccctgacctccgatggctggctg
cacacgggtgacctcgccacgatcgacgatcggggattcgtgttcatcacgggccgcaag
aaggacatcatcatcacggccggcgggaagaacatcagcccggcgccgatggaggatgtc
atcaacacatgcccgatcgtcgcccatgccgtcgtcatcggcgacggacgcccgttcatc
gccgcgctcatcgaactcgacgcggagatgacccgatcgtggcttgcctcgcagaacctc
gacatcgacgcgccgatgagcgagatcgcgaccaacgacgcggtccgagcgttggtgcag
cagtacatcgacaaggccaacggcaacgtctcccgcgccgagtcggtgcgcaagttcgtt
attctggacgaggagttcaaccaggaggacggcactctgacacccagcatgaaggtggtc
cgcccgaaggtgctgcagcgttacgccgacgtgatcgacaacatgatctatgctccgaag
aacgccgcaaagccgctgcccgccaccgtcaagatcctcgacatgaccgccgagaccgtg
aagcagtcttcggaaagcgtcaagcaggccttcgaccaggcgaagggaaagattcgcttc
atgaaggacgacgaagccaaatccggcagccccgagcaggaggacagcgtgggcgacgcg
gcatctgacggcaacgacaccagtgaggagaagtaa
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