Bifidobacterium bifidum S17: BBIF_1244
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Entry
BBIF_1244 CDS
T01328
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00220
Arginine biosynthesis
bbi00240
Pyrimidine metabolism
bbi00250
Alanine, aspartate and glutamate metabolism
bbi01100
Metabolic pathways
bbi01110
Biosynthesis of secondary metabolites
bbi01240
Biosynthesis of cofactors
Module
bbi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BBIF_1244 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBIF_1244 (carB)
00220 Arginine biosynthesis
BBIF_1244 (carB)
Enzymes [BR:
bbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BBIF_1244 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
GARS_A
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
ADO53449
LinkDB
All DBs
Position
complement(1487072..1490452)
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AA seq
1126 aa
AA seq
DB search
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMSLGEAGVLKKYNVELIGASL
DAIDRGEDRELFKKVVDEAGAESARSEVAHSMKEVDAVAAELGYPLVVRPSFTMGGLGSG
IAHDEEELHRIAGAGLHYSPTDEVLLEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVHPDTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPRLTTSMKSVGEAMALGGNFQESLGKAMRSIDKRHMGFSWDGDKPDEAEV
AELLKAITVPTEHRYLQIQRALWGGATERQIFDATKIDPWFVKQLALINQTAMEVRDAEK
LTAKLLKKAKLAGLSDLQIAHLRNLGDEGENTIRELRWTYGLRPVYKTVDTCAAEFDAVT
PYYYSCYADETELRKRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSNRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLRREHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSY
VLGGRGMEIVYDDAQLTKYVNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GEELYIGGIMEHIEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAISKGCGVKGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPKGDG
GDIHRGQQVAIKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYDGGLPTSGNVFISVNDTDKRQLPLMAVRLVELGFSIWATEGTASVLRRYGIDSKIVDK
ISTRVDSDPDAAVKVEHAVGGIGKNVVELIEEGKIDMILNTPNSRGSRSDGYSIRAAAIA
ADLPQFTTMTEFSAVLMAIEAVKHNDYQIMSIQEHAKQLFELESQE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgcaccgacatcaagtcagtgatggtcatcggctccggcccgatcgtgatc
gggcaggcggccgagttcgactactccggcacccaggcgtgccgcgtgctgcgcgaagag
ggcatccgcgtcatcctcgtgaactccaacccggccacgatcatgaccgacccggagatg
gccgacgccacctacatcgagccgatcgccacgcccatccttgagcagatcatcgccaag
gaacgccccgacgccctgctgcccaccttgggtggccagaccgcactgaacgccgcgatg
tcgctcggcgaggccggtgtgctcaagaagtacaacgtcgagctgatcggcgcctccctt
gacgccatcgaccgcggcgaggaccgcgagctgttcaagaaggtcgtcgacgaggctggc
gccgaatccgcgcgctccgaagttgcccactccatgaaggaagtggacgccgtcgccgcc
gaactcggatacccgttggtggtgcgcccgagcttcaccatgggaggcctcggctccggc
atcgcgcacgacgaggaggagctgcaccgcatcgccggcgccggcctgcattactcgccg
accgacgaggtactgctggaggagggcatcgaaggctggaaggaattcgagctcgaactg
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgatcgagaacgtcgacccggtc
ggcgtgcacaccggtgactccatcaccgtggccccctgcttcaccctgaccgatcgcgaa
taccagaagctgcgtgacatcggcatcgccatcatccgcggcgtgggcgtcgacacgggc
ggctgcaacatccagttcgccgtgcaccctgacaccggccgcatcatcgtcatcgagatg
aacccgcgcgtgagccgttcctccgccctggcatccaaggccaccggcttcccgatcgcc
aagatcgccaccaagctggcgctcggctacaccctcgacgagatccgcaacgacatcacc
cagtccacgccggcctccttcgagccgaccatcgactacgtggtcaccaaggtgccgcgc
ttcgcgttcgagaagttccccggcgccgacccgcgtctgaccacgtcgatgaagtccgtc
ggcgaggccatggcactcggcggcaacttccaggagtcgctgggcaaggccatgcgctcc
atcgacaagcgccacatgggcttcagctgggatggtgacaagccggacgaagccgaggtc
gccgaactgctcaaggccatcaccgtgccgaccgagcaccgctatctgcagattcagcgc
gctctgtggggcggcgccaccgaacggcagatcttcgacgccaccaagatcgacccgtgg
ttcgtcaagcagctggccctcatcaaccagaccgcgatggaagtgcgcgacgccgagaaa
ctcaccgccaagctgctgaagaaggcgaagctcgccggcctgtccgacctgcaaatcgcc
cacctgcgcaatctcggtgacgagggcgagaacacgattcgcgagctgcgctggacctac
ggcctgcgcccggtctacaagaccgtcgacacctgcgccgccgagttcgacgcggtcacg
ccgtactactactcctgctacgccgacgagaccgagctgcgcaagcgcgatcgcgaggct
gtcatcatcctcggctccggcccgaaccgcatcggtcagggcatcgagttcgactacacc
tgcgtgcacgcggtgcaggagctcggcaaggactatgacacgatcatggtcaactgcaac
cccgagaccgtctccaccgactacgacatgtcgaaccggctgtacttcgagccgctcacc
ttcgaggacgtgctggagatctatgaggccgagaagaagatgggcccggtcaagggcgtc
atcgtccagctcggcggccagacgccgctgtcgctggccgcgcgactcaaggccgccggc
gtgccgatcctgggcaccaccccggagtccatcgacctggccgagaaccgcgagctgttc
ggtgaggtgctgcgccgcgagcacatgaacgcgccgcgctacggcaccgcgctgtcgctc
gaagaggcccgcgaggccgcccacaacatcggctatccggtgctcgtgcgccccagttac
gtcctcggcggacgtggcatggaaatcgtctacgacgacgcccagttgaccaagtacgtc
aaccgtgcgctcgacgaggccaaggccgacacggtcgtgtccggacgcctgccctccccg
ctgctcatcgacaagttcctgcaggacgccatcgaaatcgacgtggatgccctgttcgac
ggcgaagagctgtacatcggcggcatcatggagcacatcgaagaggccggcgtgcactcc
ggcgatgccgcatgcacgctgccgccgagcacgctgtccgacgaccagatccgtcgcctt
cgcgaaggcacctacgccatctccaagggctgcggtgtcaagggcctgatcaacgtgcag
tacgccttcatggccaacacgctgtacgtcatcgaagccaacccgcgtgcctcccgcacc
gtgccgttcgcatccaaggctaccggcgtggccctggccaaggcggccgcccgcatcatg
gcaggggagaccatcgccgatcagcgggccaacggcctgctgttgcccaagggtgacggc
ggtgacatccaccgtggccagcaggtcgccatcaaggagtccgtgctgccgttcaagcgc
ttccgcacgcccgtcggcaagaccgtcgacatcctgctcggacccgagatgcgctccacc
ggtgaggtcatgggcttcgaccgtgacttcccgcacgccttcgccaagagccagctcgcc
gcatacgacggcggactgcctaccagcggcaacgtcttcatctccgtcaacgacaccgac
aagcggcagctgccgctgatggccgtccgtctggtcgagctcggattctccatctgggcc
acggagggcaccgcgtccgtgctgcgccgttacggcatcgactcgaagatcgtcgacaag
atcagcacccgcgtcgactctgacccggatgcggccgtcaaggtcgagcacgccgtcggt
ggcatcggaaagaacgtggtcgagctcatcgaagaaggcaagatcgacatgatcctcaac
acgccgaattcccggggatcgcgttccgacggatattccatccgcgctgcggccatcgcg
gccgacctgccccagttcaccaccatgaccgagttctccgccgtgctgatggccatcgaa
gccgtcaagcacaacgattaccagatcatgagcatccaggagcacgccaagcagctgttc
gagttggagagccaggaataa
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