Bifidobacterium bifidum S17: BBIF_1245
Help
Entry
BBIF_1245 CDS
T01328
Symbol
carA
Name
(GenBank) carbamoyl-phosphate synthase, small subunit
KO
K01956
carbamoyl-phosphate synthase small subunit [EC:
6.3.5.5
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00220
Arginine biosynthesis
bbi00240
Pyrimidine metabolism
bbi00250
Alanine, aspartate and glutamate metabolism
bbi01100
Metabolic pathways
bbi01110
Biosynthesis of secondary metabolites
bbi01240
Biosynthesis of cofactors
Module
bbi_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BBIF_1245 (carA)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BBIF_1245 (carA)
00220 Arginine biosynthesis
BBIF_1245 (carA)
Enzymes [BR:
bbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BBIF_1245 (carA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_sm_chain
GATase
Peptidase_C26
Motif
Other DBs
NCBI-ProteinID:
ADO53450
LinkDB
All DBs
Position
complement(1490445..1491662)
Genome browser
AA seq
405 aa
AA seq
DB search
MNQIDSETVSFAPDDAVLVLEDGQVYVGDSYGAIGKTTGEIVFATGMTGYQETLTDPSYD
RQIVVQTFPHIGDTGINREDPESSRIWVAGYVVRDPSPTVSNWRATGSLDDDLVAEHIVG
ISHIDTRKLVRHLRSAGVMRAGIFSGDALLDDEGRLKTVAALIDEVKATPQMKGLSLYDE
VSTKETYTVEPCGEYEGKEPLYTVAAVDLGVKGMTPHRMAERGCCVHVVPSTITFEELTA
LNPDGVFFSNGPGDPEQADPEVELLRKVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGH
RGINQPVKDLTTGKVEVTAHNHGFAVDAPIGETVDAPFDNGHFGKVFVSHIDLNDDVVEG
LQCVDIPAFSVQYHPEAAAGPHDAAYLFDRFVDLMKTSKEENRNA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagattgattccgaaaccgtgagttttgcccctgatgacgccgtgcttgtactt
gaggacgggcaagtgtatgtgggtgactcttacggcgcgatcggcaagaccactggcgag
atcgtgttcgcgaccggcatgaccggttatcaggagactttgaccgatcccagttacgat
cggcagatcgtggtgcagacgttcccgcacatcggggacacgggaatcaaccgggaggat
ccggaatcctcccgtatctgggtggccggatacgtggttcgcgatcccagccccaccgtc
agcaactggcgggccacgggcagccttgacgacgatctcgtcgccgagcacatcgtcggc
atcagccacatcgacacccgcaagctggtgcgccatctgcgctccgcgggcgtcatgcgt
gccggaatcttctccggtgacgcactgctcgacgacgaagggcgcctgaagaccgtcgcc
gcgctcatcgacgaggtcaaggccaccccgcagatgaagggtctgagcctgtacgacgag
gtcagcaccaaggagacgtatacggtcgagccgtgtggcgagtacgagggcaaggagccg
ctctacaccgtcgccgccgtggatctcggagtcaagggcatgaccccgcatcgcatggcc
gagcgcggctgctgcgtgcacgtcgtgccgtccaccatcactttcgaggaactcaccgcg
ctgaacccggacggcgtgttcttctccaacggccccggcgacccggagcaggccgacccc
gaggtcgagctgctgcgcaaggtcctggacgccggctacccgttcttcggcatctgcttc
ggcaatcagctgctcggccgcgcactcggcttcggcacctacaagctcaagttcggccat
cgcggcatcaaccagcccgtcaaggacctgaccaccggcaaggtggaggtcaccgcgcac
aaccacggcttcgcggttgacgcgcctatcggcgagaccgtcgacgccccgttcgacaac
gggcacttcggcaaggtgttcgtcagccacatcgatctgaacgacgacgtggtcgaaggt
ctgcagtgcgtggacatccccgcgttctccgtgcagtaccatcccgaggcggcggccggc
ccgcacgacgccgcatatctgtttgaccgtttcgtcgatctgatgaagacgtccaaggag
gaaaaccgcaatgcctaa
DBGET
integrated database retrieval system
