Bifidobacterium bifidum S17: BBIF_1332
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Entry
BBIF_1332 CDS
T01328
Symbol
dnaQ
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03030
DNA replication
bbi03430
Mismatch repair
bbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBIF_1332 (dnaQ)
03430 Mismatch repair
BBIF_1332 (dnaQ)
03440 Homologous recombination
BBIF_1332 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbi03032
]
BBIF_1332 (dnaQ)
03400 DNA repair and recombination proteins [BR:
bbi03400
]
BBIF_1332 (dnaQ)
Enzymes [BR:
bbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBIF_1332 (dnaQ)
DNA replication proteins [BR:
bbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBIF_1332 (dnaQ)
DNA repair and recombination proteins [BR:
bbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBIF_1332 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
TTC3_9th
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADO53537
LinkDB
All DBs
Position
1609264..1609806
Genome browser
AA seq
180 aa
AA seq
DB search
MLPDGTLPDDYVVLDLETTGVSWYRDTIIEFGAVKVVDRKPVDTYQQLVNPMRNLNPFIT
QLTGITPDMLEPAPTLDTVLPDFLRWCGDDAMIGHNIMRFDIKFIDLAAQRILHHAVPNR
IIDTLQMSRSMYPQYNRHRLVDLIQRFDIADVEEHRALSDAEQTQMCFEYMRDEQRRRDC
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgacgggacactgcccgacgattatgtcgtactggatctggaaaccaccggt
gtcagctggtatcgggacaccatcatcgagttcggagcggtgaaggtcgtcgaccgcaag
cccgtcgacacctatcagcagttggtcaatccgatgcgcaacctcaatccgttcatcacg
cagctgaccggcatcacgccggacatgctcgaaccggcaccgacgctggacaccgtgctg
cccgacttcctgcgctggtgcggcgacgacgcgatgatcgggcacaacatcatgcggttc
gacatcaagttcatcgatctggcggcgcagcgcatcctgcatcatgcggtgccgaaccgc
atcatcgatacgttgcagatgagccggagcatgtacccgcagtacaaccgacaccggctg
gtcgacctgatccagcgtttcgacatcgccgacgtcgaggagcaccgcgcgctgtcggac
gccgagcagacgcagatgtgcttcgaatacatgcgcgacgagcagcgtcgcagagactgc
tga
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