Bifidobacterium bifidum S17: BBIF_1341
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Entry
BBIF_1341 CDS
T01328
Name
(GenBank) Helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbi03032
]
BBIF_1341
03029 Mitochondrial biogenesis [BR:
bbi03029
]
BBIF_1341
Enzymes [BR:
bbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBIF_1341
DNA replication proteins [BR:
bbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BBIF_1341
Mitochondrial biogenesis [BR:
bbi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BBIF_1341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
Pif1_2B_dom
AAA_22
Viral_helicase1
AAA_16
NTPase_1
DEAD
AAA_11
nSTAND3
cobW
TrwB_AAD_bind
AAA_24
Herpes_Helicase
AAA_14
MeaB
SH3_13
SLFN-g3_helicase
IstB_IS21
UvrD_C_2
AAA_5
AAA
ABC_tran
Helicase_RecD
Zeta_toxin
KdpD
AAA_25
AAA_7
ResIII
TsaE
MMR_HSR1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ADO53546
LinkDB
All DBs
Position
complement(1620278..1621690)
Genome browser
AA seq
470 aa
AA seq
DB search
MRQSEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGANVAVTASTGIAATHIDGQ
TIHSWSGVGLANVLTPNLLKTIKTRRRRKIQAADVLIIDEVSMMHAWLFDMVDQVCREVR
HDPRPFGGLQVVLSGDFFQLPPVSVSGRDRDVLPPGPDFVASRERYAKAGLNPEGFVTES
LVWGELAPVICYLTEQHRQDDGRLLHVLTDIRAGCVDQDDRDALVTRLGVTPKPGEVAVH
LFPVNRQADNLNDSRLARIGEEPHEFHAKQMGPAHLVERLKRNMLAPECLVLKTGAAVMA
LRNDADHQYVNGSLGTVRGFANESKGGWPIVEFENGNIVTMKQATWEMMDGDTVMASVAQ
VPLRCAWAITIHKSQGMTLDRAVMDLSRTFAPGMGYVALSRVERMGGLYLAGVNERMFAV
SADAVMLDGDLRGRSQAASARLGNEGVAAFRPQTPHEDEPAGEFEQAELF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtctgaggcgctcgcgattctgaacgccggcgcgaacgtgttcctgacgggt
gcgcccggcgcaggaaagacgtacgtgctgaacgagttcatccggcaggcgcgcgcagac
ggcgcgaacgtggccgtcaccgcgtcaacgggcatcgccgccacgcatatcgacggccag
accatccactcgtggagcggcgtcggactcgccaacgtgctgacgccaaatctgctgaag
accatcaagacccgtcgtcggcgcaagatacaggcggccgacgtgctcatcatcgacgag
gtgtcgatgatgcacgcttggctgttcgacatggtcgatcaggtgtgccgtgaagtgcgg
catgatcctcggccgttcggcggattgcaagtggtactgtccggcgacttcttccagctg
ccgccggtctccgtgtccgggcgcgaccgcgacgtgctgccgcccggcccggatttcgtg
gcgtcccgtgaacggtacgcgaaggccggactcaatccggaaggattcgtcaccgaatcg
ctggtgtggggcgaactcgcgccggtcatctgctatctgaccgagcagcatcgtcaggac
gacggccggctgctgcacgtgctcaccgacatccgcgccggatgcgtggatcaggatgac
cgtgacgcgctcgtcacgcggctcggtgtgacaccgaagccgggcgaggtggcggtccac
ctgttccccgtcaaccggcaggccgataatctcaacgattccaggcttgcgcggataggc
gaggagccgcacgagttccatgccaagcagatggggccggcccatctggtcgaacggctc
aagcgcaacatgctggcgccggagtgcctcgtgctcaagaccggtgccgccgtcatggcg
ctgcgcaacgacgccgaccaccagtatgtcaacggttcgctcggtaccgtgcgcggcttc
gccaacgagagcaagggcggctggcccatcgtcgaattcgagaacggcaacatcgtcacg
atgaagcaggccacgtgggagatgatggacggcgacacggtgatggcgtccgtggcgcag
gtgccgctgcgctgtgcgtgggcgatcaccatccacaagtcgcaggggatgaccctcgac
cgggcggtgatggatctgagccgcacgtttgcgcccggtatgggatacgtggcgctttcg
cgtgtggaacgcatgggcggattgtatcttgccggcgtcaacgagcgcatgttcgcggtt
tcggcggatgcagtgatgctcgacggcgatttgcgcggcaggtcacaggccgccagcgcg
cggctgggcaacgagggcgtggctgcgttccggccgcaaacgcctcacgaggacgagcct
gctggcgaattcgaacaagccgagctgttctag
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