Bifidobacterium bifidum S17: BBIF_1435
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Entry
BBIF_1435 CDS
T01328
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBIF_1435 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbi01007
]
BBIF_1435 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbi03016
]
BBIF_1435 (lysS)
Enzymes [BR:
bbi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
BBIF_1435 (lysS)
Amino acid related enzymes [BR:
bbi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BBIF_1435 (lysS)
Transfer RNA biogenesis [BR:
bbi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BBIF_1435 (lysS)
Prokaryotic type
Other AARSs
BBIF_1435 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADO53640
LinkDB
All DBs
Position
complement(1723764..1725455)
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AA seq
563 aa
AA seq
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MSQTQETPESLNDDETAPAVPVMTTVERAEMLLRQDAAIRDRIGAGATLDEAVDPSNKEF
GPLAHPEQVQMRVAKRAMMLEAGMQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGI
AGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLYLRGRVI
ASKTGELSVFATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKA
VASLRRTFDDHDFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVG
GIDRVFEINRDFRNEGVDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHK
VTLLDGTEYDFGGNWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERD
DVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFEL
ATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLL
IALTGATIRETITFPLVKPLALQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagacgcaagaaacccccgaatccctgaacgacgacgagacggcgcccgctgtt
cccgtcatgaccacggtcgaacgtgccgagatgctgctgcgacaggacgcagccatccgc
gaccgcatcggcgccggcgcaactttggacgaggccgtcgatccctccaacaaggagttc
ggcccgctcgcgcaccccgagcaggtgcagatgcgcgtcgccaagcgcgcgatgatgctt
gaggccggcatgcagccctacccggtgcacctcgacgtgaccgacaccatcgaggccgtg
cgcgccaagtatgacggcaagcttgaagccggtcaggagaccgaggacgtggtcggcatc
gccgggcgcgtcctgtttctgcgcaacggcggcggcctgtgcttcgtgcagctgtcggcc
ggcgacggcacgaagatccagggcatgatctccaagaaggagatcggcgctgactcgctc
aagcagttcaagcagcttgtggacctcggcgaccacctgtacctgcgcggccgcgtgatc
gcgtccaagaccggcgagctgtcggtgttcgccaccgaatgggccatcgcgtccaaggcg
ctgcagccgctgcccgccctgcacaaggacctgaacgacgacacgcgcacgcgcaagccg
tacatcggcatgatcgccgatgagaaggtgcgcaacatggtgcgcaaccggtccaaggcc
gtcgcctcgctgcgccgcacgttcgatgaccacgacttccttgaggtcgagacgccgatg
ctgcagactatccacggcggtgccgccgcccgtccgttcaccacgcacatgaacgccttc
gacctggacctttatctgcgcatcgcgccggaactgttcctcaagcgctgcctcgtgggc
ggcatcgaccgcgtgttcgagatcaaccgcgacttccgcaacgagggcgtcgacgccacg
catgcccccgagttcacgatggtcgaggcctaccaggcgtacggcacctacgacaccatc
ggtcagctggtcaaggagctcgtgcagaagaccgcgatggacgtgttcggctcccataag
gtcacgctgctcgacggcaccgaatacgatttcggcggcaactggaagaccatcagcatg
tatgattcgctctccgaggcgctcggcgaagagatcgtgccgaacggcgggccggacaac
cccggcacttccgtggagcatctgggcgagatcgccgacaagctcggcgtggagcgtgac
gacgttgagaaccacggcaagctcgtcgagcacctgtgggagcacttctacgaggacaag
ctatacgagccgaccttcgtgcgcgacttcccggtcgagacctccccgctggtcaagggc
caccgcaacaaggccggcgtggtggagaagtgggacctctacgtgcgcggcttcgagctg
gccaccggctactccgagctcaacgacccgatcgtgcagcgcgagcgtttcgtggcccag
gccaaggacgcgctggccggcgacgaggaggcctgcgacatcgacgaggacttcttggag
gccctcggcgtgggcatgcccccggcgggcggcatgggcatgggcatcgaccgactgctc
atcgccctgaccggtgccacgatccgcgagaccatcaccttccctctggtcaagccgctg
gcgttgcagtaa
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