Bifidobacterium bifidum S17: BBIF_1475
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Entry
BBIF_1475 CDS
T01328
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbi
Bifidobacterium bifidum S17
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbi03016
]
BBIF_1475 (truA)
Enzymes [BR:
bbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBIF_1475 (truA)
Transfer RNA biogenesis [BR:
bbi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBIF_1475 (truA)
Prokaryotic type
BBIF_1475 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADO53680
LinkDB
All DBs
Position
complement(1790660..1791556)
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AA seq
298 aa
AA seq
DB search
MRIDLAYDGGGFFGWAKQPTIRTVQGEIERVLHTITRVPVDDPAEPLRLTVAGRTDTGVH
ASHQVCHLDIGEETLSRCVGHMSVPPTVALKHRLQRMLPADITIHDVTVAPSGFDARFSA
LERTYVYRVADRASEVDPRLRGFVLHLDADLDVVAMNEAAAMTIGLHDFGSFATPNPGGT
TIREVKTAYWRRIPTRPLVVDGMGERYRTPAAESDLLCFTIVADAFARNMVRSLVGGCIQ
VGMGKRSTDWFREKMAVPLREGSTGPIAPQGLTLEHVAYPADDELAERAERIRAKRTL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcattgacctggcatatgacggcggcggcttcttcggatgggcgaagcagccgacg
attcgcaccgtgcagggcgagatcgaacgggtgctgcacacgattacgcgcgtgccggtc
gacgatcccgccgagccgctgcgcctgaccgtcgccggccgcaccgacacgggcgtgcac
gcctcgcatcaggtctgccatctcgacatcggcgaggaaacgctgagccgctgcgtcggg
cacatgagcgtgccgccgaccgtagcgctcaagcaccgtctgcaacgcatgctgcccgca
gacatcaccatccatgacgtgacggtcgcgccgagcggattcgacgcgaggttctccgca
ctggaacgcacttacgtgtatcgcgtggccgaccgtgccagcgaagtcgacccgcgtctg
cgcggcttcgtgctgcacctcgacgccgacctcgacgtcgtcgcgatgaacgaggccgcc
gcgatgaccatcggactgcatgatttcggctcgttcgccacccccaatccgggcggtacc
acgattcgcgaggtcaaaaccgcatattggcggcggatccccacccggccgctggtcgtc
gacggcatgggggagcgataccgcacgccggccgccgaatccgacctgctgtgcttcacc
atcgtcgccgacgccttcgctcgcaacatggtgcgctcgctggtcggcggctgcatacag
gtcggcatgggcaagcgctcgaccgactggttccgagagaagatggccgtgccgctgcgc
gagggctccacagggccgatcgcgccgcaagggctgacgctggagcacgtcgcctatccc
gccgacgacgagctcgccgaacgggccgagcgtatacgcgccaagcgcacgctgtag
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