Bifidobacterium bifidum S17: BBIF_1695
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Entry
BBIF_1695 CDS
T01328
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bbi
Bifidobacterium bifidum S17
Pathway
bbi03030
DNA replication
bbi03430
Mismatch repair
bbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBIF_1695 (dnaX)
03430 Mismatch repair
BBIF_1695 (dnaX)
03440 Homologous recombination
BBIF_1695 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbi03032
]
BBIF_1695 (dnaX)
03400 DNA repair and recombination proteins [BR:
bbi03400
]
BBIF_1695 (dnaX)
Enzymes [BR:
bbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBIF_1695 (dnaX)
DNA replication proteins [BR:
bbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBIF_1695 (dnaX)
DNA repair and recombination proteins [BR:
bbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBIF_1695 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADO53900
LinkDB
All DBs
Position
complement(2051997..2054855)
Genome browser
AA seq
952 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDSGKLTHAYLFSGPRGCGKTSSARILARC
INCVKGPTSHPCGECASCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPDHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLEEICAKESIKPEPGVLKLAMRAGGGSVRDTLSVLDQLMVGAVDGVIAHDAAV
ALLGFTPEALIGEAVDAVIARNGEALYGVVQKVVVGGFDPRRFVEDLLARVRDLLVLTLG
GAQAESVLSDAAEAEDMDDLRRQASSLGLGALTSMAETINTTLGSMTGAISPRMRLELLA
ARLLAGREGLDVAPAAGGTAPGADSAGTGRGAAGVNARTGGIAESRSGGTTPRRGGFIGS
ARNQQTDARQSAASQTNTSPSRTAGTQPDRALQTEAPTMAEAPATADAQAGAPSPVAQAP
SASRVPPAGEPTAAQSSPQGDDRTPDERWDALVAGLPADVAAYVNRSKVPRIHLEQHEPG
GKGTLWIKFDKALSKYAFAKAVAGEEVGGTRNVVQIMRAETRKAFGDQVQLAPTKKMADG
QVAPPFGQLPADEQQRISAQIVKVSLSASLGAMSVGNNAKEPQTPPESGDTASADADEVH
RAVPDAPDATVAHDRDNNRAVAQDTSRADAQSAVDPWALPEAGAGDAWSPTDGASHNVSR
DVSRNAPQDEGHHAKHIVVPDLSDDTDPWANDGGNSMPVDGVRGGDAPGTPQNVAHAQSQ
SREDSERTNPGPTAVPESMSAEDPWAGMPSSVASASSSIAAPSADSPAALQGPSDDLAAP
GRPENPGVEPGTTHLQQTPGAAAGQRASRPAYDDTDPFAGADPYAQEDIPMPTVAPEDDE
YSMNDVSLGSPETMSLDDVKQFFEVVKPVEEYGPDDPKNPRNIQHVNKHDSE
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgacgttatcgaccggacacgtttgagggggtcatcggtcag
gatcaggtcactgttccgctgatgcgggccctcgacagcggcaagctcacgcatgcgtac
ctgttttccgggccgcgtggctgtggtaagaccagttccgcgcgtatcctcgcgcggtgc
atcaactgcgtcaaggggccgacctcgcatccatgcggggaatgcgccagttgcaaggac
ctcgccactggcggtccaggttccatcgacgtggtggaaatcgacgcggccagtcacaat
ggcgtcgacgacgcccgtgaactgcgagagcgcgccggattcgcccccgctcgggatcgc
tataagattttcattcttgacgaggcgcacatggtcacccagcagggtttcaacgcgttg
ctgaagattgtcgaggaaccgccggaccatgtgatgttcatcttcgcgaccaccgaaccc
gacaaggtgatcggcaccatccgttcgcgtacccatcattacccgttccggctggttccc
caggaggtcatgggaccgtatctggaggagatttgcgccaaggaaagcatcaagccggaa
cccggcgtgctcaagctggcgatgcgcgccggcggcggttcggtgcgtgacaccctgtcg
gtgctcgatcagttgatggtcggcgcggttgacggcgtgatcgcccacgacgccgccgtg
gcgctgctcggcttcacgccggaggcgctgatcggcgaggccgtggacgccgtcatcgcg
cgtaacggcgaagcgctgtatggcgtggtgcagaaagtcgtggtgggaggattcgacccg
cgtcggttcgtcgaggatctgctggcgcgggtgcgtgatctgctggtgctgacattgggc
ggcgctcaggcagaaagcgtgctttccgatgctgccgaggccgaggacatggacgacctg
cgtaggcaggcgtcgtcgcttggcttgggtgcgttgacgtcgatggcagaaaccatcaat
accaccctggggtctatgaccggggcgatttctccgcgcatgcggctcgaattgctcgcc
gcgcgcttacttgccgggcgagagggactggatgtcgcgccggccgcgggcggcactgcg
cccggggcggactctgcaggtactggccgcggagctgcaggagtgaatgcgcgaacaggc
ggcatcgccgagagccggtcaggcgggacgactccgcgcaggggaggattcatcggatcc
gctcgcaaccagcagacggacgctcgccaatcggcggcaagccagacgaatacgtcacca
agccgaaccgccggcacccaacctgatcgcgcactccagacggaagcgcccactatggcg
gaagcgcctgcaacagcggatgcgcaagccggtgccccgtctcccgtcgctcaagcaccg
tccgcctctcgagtaccgccggccggtgagccgacagccgcgcaatcctctccgcagggc
gacgaccgcacgccggacgagcgctgggatgcactggtcgccggattgccggcggacgtc
gccgcgtacgtgaaccgcagcaaggtgccgcgcatccacttggaacagcacgagccaggc
ggaaaaggcacgttgtggatcaagttcgacaaggcgctgagcaagtatgccttcgcgaag
gccgtcgctggtgaggaagtcggcggaacccgcaacgtggtgcagatcatgcgcgctgag
acccgcaaggcgttcggcgaccaagtgcagctcgcgcccaccaagaagatggccgacggg
caggtcgcgccgccgttcggccagctgccggcagacgagcagcagcgcatcagtgcccag
atcgtcaaagtgagtctcagcgcatcattgggggcgatgagcgtcggcaacaatgccaag
gagccgcagactcctcccgaaagcggcgacaccgcatcggccgatgcggacgaagtccat
cgagccgtacccgacgcgccggacgcgacagtggctcatgaccgcgacaataaccgggcg
gtcgcacaggatacctcgcgtgcggacgcgcagtcggcagtggatccgtgggcgctcccg
gaagcgggggctggcgacgcttggtcaccgactgacggtgcgtctcacaatgtttcacgg
gatgtttcacggaatgctccgcaagatgagggccatcacgcgaaacacatcgtcgtgccg
gatttgagcgacgacaccgacccgtgggccaacgacggcggtaacagtatgcccgttgac
ggtgtacgcggtggcgacgcgcccggcacacctcagaacgttgcccatgcgcagtcacag
tcgcgagaggactccgagcgcaccaaccctggccccaccgccgtgccggagtccatgtcc
gcggaagacccctgggctggcatgccgtcatcagtcgcttccgcttcgtcgagcatcgcc
gcgccaagcgcagactccccggcagctctccaagggccttccgacgacttggctgcaccc
gggcgcccggaaaaccccggagtcgaaccgggaacgacgcatctgcagcagactcccggt
gccgcggccggtcagagagcatcccgccctgcgtatgacgacaccgatccgttcgccgga
gccgacccgtatgcgcaggaggacattcccatgccgaccgtggcgccggaagacgacgaa
tattcgatgaatgacgtttcacttggctcgcccgagacgatgagtctcgacgacgtcaag
cagttcttcgaagtcgtcaagccggtggaggaatacggccccgacgaccccaagaacccc
aggaacatccagcacgtcaacaaacatgattcggagtga
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