Bombus bifarius (two-form bumblebee): 117204257
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Entry
117204257 CDS
T07537
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117204257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbif03400
]
117204257
DNA repair and recombination proteins [BR:
bbif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117204257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
RSS_P20
AAA_27
Pro-kuma_activ
Motif
Other DBs
NCBI-GeneID:
117204257
NCBI-ProteinID:
XP_033297377
UniProt:
A0A6P8M7C6
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAVQPNQQFNMDPPSQQSFVRFFKNLPEKLNTTIRFFNRSDYYTLHGNDALFAAQEVFKT
TSVCKMIGADPYKTEGVILNKNHFESFIRDLLLVKQYRVEVYVNQGSAKNQNWVLEYKGS
PGNLTQFEDTLFGNNDVAVSVHVIAVKLGMEAKSRIVGLSCVDTTATSFSVCEFQDNESF
SNLESMVVTLAPKECLLIQGEGSYEFQTLKQVMERNNVMVTTRKRSEFSSESVIQDLNTL
IKFKKGQQQNVQSLPEINLSFAMSATSALIKYLDLTSDEGNLNQFAIDQIKESRYLKLDS
AAIKALNIESRVDTSSILNGNAPTSILGILDKCRTSQGHRLLAQWIRQPLKDLCLIKERH
DIVETLVNDNELRTNLSEDHLRRIPDLQVLAKKLARKKSTLQDLYKIYMCISHLPRLLEQ
LSNINVTALKTMFSDPLSELITDMDKFQQMVEQTIDLDSAEKGDFLVRAEFDDELKELKN
TMDEVEAKLQSQLGKVANDLSIEAGKTLKLESNQQLGYYFRVTLKEEKVLRNKKQYIILD
SNKSGVRFRSNKLNDLNDEYIVARDKYTVEQKKVVTEIIEIAAGYSSTIKAIGNVLASLD
VLTAFASVAVSANKPYVRPEMLPTEAGEFNLTQVRHPCLEIQEGVDFIANDISFKRGECH
FRIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEVSAVKNQHVTALVDDNKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEF
AKRKQAELEDYQDSVFEGSDNPQKKQDIIKEAEVLIAEFISKCRNLDKSLSDAELEDKIS
TFKREVLSHENPYIKTLLSAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaccaaatcaacaatttaatatggatccaccaagtcaacagagttttgtt
agattttttaaaaatctaccagaaaaacttaataccactatacgattttttaatagatca
gattattacacattacatggtaatgatgctttatttgctgcacaagaagtttttaaaact
acgtcagtttgtaagatgataggagctgatccatataaaaccgagggtgttattcttaac
aaaaatcattttgaatcttttatacgtgatctactgttagtaaaacaatacagagtagaa
gtttatgttaatcaaggatcagcaaaaaatcaaaattgggtattagaatataaaggttct
cctggaaatttaacacaatttgaagatacactgtttggcaataacgatgttgctgttagt
gtacatgtcatagcagtgaaattaggaatggaggcaaaatctagaattgttggcttaagc
tgtgtagatactacagcaacttcattttctgtttgtgaatttcaagacaatgaatcattt
tccaatttggaatcaatggttgtcacactcgctcccaaagaatgtttattaattcaaggt
gaaggcagctatgaattccaaactcttaaacaagtcatggaacgaaataatgtaatggtt
actacaagaaaaagaagtgaattttctagtgaatcagttatacaagatttaaatacttta
ataaaattcaagaaaggtcaacaacaaaatgtacagtctttacctgaaatcaatttaagc
tttgctatgtcagctacttctgcgcttattaaatatttagatttaacatcagatgaagga
aatttaaatcaatttgctatagaccaaataaaggagtcacgttatttaaagctagattca
gctgctataaaagcacttaatatcgaatcacgtgttgatacctcctctattttaaatgga
aacgcacctacaagtattttgggcattttggataaatgtaggacttcacaaggtcataga
ttgcttgcacaatggattagacaacctttaaaagatttatgtcttataaaagaaagacat
gatattgttgaaacactagtgaatgataatgaattacggactaatcttagtgaagatcat
ttaagacgcataccggatttgcaagtgcttgcaaaaaaattggccagaaaaaaatcaact
ttacaagacctttataagatttacatgtgtatatcacatttgcctagattattagaacag
ctttctaatataaacgtaacagccttaaaaacaatgttcagtgatcctttgagtgaactt
attacagacatggacaaatttcaacaaatggttgaacaaacaattgatttagattccgcc
gaaaaaggagatttcttagtacgagccgaatttgatgatgaattgaaagaattaaaaaat
actatggatgaagtggaagcgaaattacaatctcaattgggtaaagttgctaatgatctt
tcaatcgaagctggaaaaactctaaaactagaatcaaatcaacagcttggatattatttt
cgtgtaacattgaaagaagaaaaagtactaagaaataagaaacagtatattattctggat
tctaataaaagcggtgtacgatttcgaagcaataaattaaatgatttaaatgatgaatac
attgttgctagagataaatatacagtggaacaaaaaaaggttgttacagaaataattgaa
attgcagccggttacagtagtacaataaaagctattggaaatgtattggcatctcttgat
gtacttactgcttttgcttctgttgctgtaagtgctaataaaccatatgtacgtcctgaa
atgctacctacagaagctggtgagtttaatcttactcaagttcgacatccatgtttggaa
attcaagaaggagtagattttatagctaatgatatcagttttaaaagaggcgaatgtcat
tttcgcatcataactggtccaaatatgggaggtaaaagcacctatataagatctgctggt
gtcagtgctttaatggcacatattggaagctttgttccttgcgatcaagcaagaatatca
ttattggattgtatattagcccgtgtaggagctgatgattctcaattaaaagggctttct
acatttatgatggaaatgatagaaactgctgctatattaaaaacagcaacttgtaattcc
ctcgtgttaattgacgaattaggcagaggaacttctacttatgaaggttgcggtatagca
tggtcaatcgccgaatatttagcaaaagaaatcaaatgctactgtctttttgcgacacat
tttcatgaaataactaaattagaagaagaagtatctgccgttaaaaatcaacacgttaca
gcccttgtagacgataataaattaactttattatataaagtaaaacctggtatatgtgat
caaagttttggcatacatgtcgctaaaatggctaatttcccacaagatgttatagagttt
gctaagcgtaaacaagcagagcttgaagattaccaagactcagtttttgaaggttctgat
aatccacaaaaaaaacaagatattataaaggaagctgaagttcttattgcagaatttatt
agtaaatgcaggaatttagacaaatcattatctgatgcggaactggaagataaaatttca
acatttaaaagagaagttctatctcacgaaaatccctacataaagacactcctatcagct
tcttaa
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