Bombus bifarius (two-form bumblebee): 117204447
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Entry
117204447 CDS
T07537
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif04140
Autophagy - animal
bbif04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117204447
04148 Efferocytosis
117204447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbif04131
]
117204447
Membrane trafficking [BR:
bbif04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
117204447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
zf-RING_5
WDR55
TPR_7
zf_RING_Vps8_fungal
zf-RING_Vps41
Vps39_1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
zf_RING_Vps8
zf-RING_2
PEP5_VPS11_N
Beta-prop_WDR19_1st
zf-C3H2C3
EIF3I
zf-C3HC4_3
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117204447
NCBI-ProteinID:
XP_033297746
UniProt:
A0A6P8LCD5
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MENTSNKEEQNNQNDSDSEVDEVEPRLKYVRVRNDLEHILQNDAASCIAVHPKFLCLGSH
WGMIHLLDHQGNNIQSKSLQAHTVAVNQISIDHNGDFIASCSDDGKVFIYGLYSTENNHN
MSMGRLVKSIAIDPNYYKSCSGRRFITGDDKLVLYEKTFLSRMKLTVLCDAEGGVRSIAW
IGHFVAWASDTGVRIYDLNAKCSLGLIKWTRSTDALPEHYRCNLRWSDDRTLLIGWVDIV
RICQIRKRSIQEMVNRDLPEFVVDPVSTFQVDFYISGIAPLENQLVLLGCLKELDEDGKS
QRPTLHVVEPKYHDFTLVCANSLTLRGYKEYSCNDYHLDCLKEENRFFIVSPKDIVVASL
YDADDRIEWLLSHGKFEQALEAVTLDNGKDCKKYTFVYVGRIYLDHLLACGKYDEAGKLC
SKILGKDKKLWEEEVYKFARVHQLRSISSYLPRGDVTLDPLIYEMVLYEYLKMDPDGFLQ
LVKEWSPKLYKVAAVVNGVLEHLIVDNQRQNVLLEALAILYIHDEKYDKALAMYLKLRHK
DVFQLIKKYHLYNTVYDMIEGLMDLDAERAIQFFLEKDAVPSDIVVQKLQHNHRYLYLYL
DELNKKDTEDKYHGLLVQLYANYSRDKLLPLLRRSNNYPIQQALDICSQRKFYPEMVYLL
GRIGNTSEALALMTRELNDMQSAIAFCQEHDDEELWNDLIIYSLDKPKAITFLLQKIGTY
VDPRLMVQRIEPSLEIPGLKKALVKMMCDYNLQVSVQEGCRKMLSNDYFNLHERLVKCYQ
KGIFIDDDQMCGACHRKIIVREPRNLVVFYCKHSFHEDCLPNFEVVENCVICNSQKDISP
SRK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacctcgaataaggaagaacagaataatcagaatgattcagactctgaggta
gatgaggtagaacctagactcaaatacgtcagagtacgaaatgatttagaacatatatta
caaaatgatgcagctagttgcattgcagtacatcctaagttcctatgtctgggttcacac
tggggtatgatacatcttttagatcatcaaggaaataatatacagtctaaaagtttacaa
gcacatacagttgctgtcaatcagatttctatagaccataatggagatttcattgcatcc
tgtagtgatgatggaaaagtttttatatatggtctttacagcacagagaataatcataat
atgagcatgggtagattagttaaaagtatagctatagatccaaattattataaaagttgt
agcggaagaagatttattacaggggatgataaattggttttgtatgaaaaaacattttta
tccagaatgaaactaactgtattgtgcgatgcggaaggaggagtaaggtcaattgcatgg
attggacattttgtggcttgggcatctgatactggtgtcagaatctatgatttaaatgcc
aaatgttcattaggtctcattaagtggactagatctactgatgcattaccagaacattac
agatgtaatcttcgatggtcagatgatagaacattattaattggttgggttgacatagtg
cgaatttgtcaaattagaaagaggtcaatacaggaaatggttaatagagacctaccggaa
tttgtggtagatccagtttcaactttccaagtggatttttatatttccggtattgcacct
ttagaaaatcagttagtattactaggttgcttgaaagaattggatgaagatggaaagagt
cagaggcccacattacatgttgttgaaccaaagtatcatgattttactcttgtgtgtgca
aattcgcttacacttcgtggttataaagaatacagttgtaatgattatcatttagactgt
ttgaaagaggaaaacaggttttttattgtcagtccaaaagatattgttgtagctagttta
tatgatgcggatgacagaattgagtggctattgagtcatggaaaattcgaacaagcatta
gaggcagtaacattagataatggcaaagattgtaagaagtacacttttgtttatgttggc
cgtatatacttagatcatttgttagcttgtggaaaatatgatgaagcaggaaaactctgc
tctaaaattttaggaaaggataaaaaattgtgggaggaagaagtatataaatttgcaaga
gttcaccaactgaggtctatttcttcttacctcccaagaggcgatgtcacgttagatcca
ttgatttacgaaatggttctttatgaatatttgaaaatggatcctgatggatttcttcaa
ctagtcaaagaatggtctcctaaattatataaagttgcagctgttgtaaatggtgttttg
gaacatcttatcgttgataatcaacgacaaaatgtactgttagaagctttagctattcta
tatattcatgatgaaaaatacgacaaagcgttagccatgtatttaaaattgagacataaa
gatgtatttcagcttattaaaaaataccatctgtataataccgtttacgacatgatagaa
ggtttaatggatttagatgcggaacgtgctatacaattttttttagaaaaggatgcagta
ccatctgatatcgttgtacaaaaattgcagcataatcatcgatatttatacttgtattta
gatgaattaaataaaaaagatacagaagataaatatcatggattgttagtccagctttat
gctaattattcaagagataaattgttacctcttctacgccgttctaataattatccaata
caacaagcactagatatctgtagtcagcgaaaattttatccagaaatggtatatctactt
ggtagaattggaaacacttctgaagctttagcacttatgactagagaattaaacgatatg
cagagtgcgatcgcattttgtcaagaacacgatgacgaggaactgtggaatgatttgatt
atttattctttggataagcccaaggctattacatttttgttgcaaaaaataggcacatat
gttgatcctagacttatggtacaaagaatagaaccgtctttagaaattcctggtttaaag
aaagctttagttaagatgatgtgtgactacaatctccaagtgtcagtacaagaaggatgt
agaaaaatgttatccaatgattatttcaatttacatgaaaggctagttaaatgttatcaa
aaagggatatttatagatgatgaccaaatgtgtggagcttgccataggaaaataattgta
agagaaccaaggaatctagttgtattttattgtaaacattcgtttcatgaagattgtcta
ccaaatttcgaggtagtggaaaattgtgttatatgtaactcgcaaaaagatatatctcct
agcagaaaatga
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integrated database retrieval system
