Bombus bifarius (two-form bumblebee): 117205451 Help Entry 117205451         CDS       T07537                                  Name (RefSeq) protein similar-like isoform X1   KO K08268   hypoxia-inducible factor 1 alpha Organism bbif  Bombus bifarius (two-form bumblebee) Pathway bbif04137   Mitophagy - animal bbif04140   Autophagy - animal bbif04148   Efferocytosis Brite KEGG Orthology (KO) [BR:bbif00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     117205451    04137 Mitophagy - animal     117205451    04148 Efferocytosis     117205451  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:bbif03000]     117205451 Transcription factors [BR:bbif03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     117205451 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS PAS_11 PAS_9 PAS_4 HLH PAS_2 Motif Other DBs NCBI-GeneID:  117205451 NCBI-ProteinID:  XP_033299729 UniProt:  A0A6P8LN86 LinkDB All DBs Position Unknown AA seq 1396 aa AA seqDB search MIASRVQPIDTLADNEPGRCSDWIARQSDNASFYDDQSTLPSCQFARAQIQPLSVDDYHH SLNPCVDRSYNDQDKNPFESRSADVGTSNAQVFLPCMESSIPIELLQPQPQSQCSQFRDC AQNITPKGAKNCQLGPVDVEDLALCFESDKPQTNCSLRVYRPSSSSNFRRRVKATRYGPY PGSLTDDKQFEQPGFSLMDVSSSDLPRMDWFGEQFCGYFSQPFAFCTEERWLQCPESDRC PLYDTTYSYGQNVLPPCLDLRNEYYQYEYNEDEQLLEDYLCNEKRKEKSRDAARYRRSKE TDIFSDLAAALPLPSEQASHLDKASVMRLAIAYLKVRSVVDSFPGTLTKSETLNHMDELF SKALNGFMLVLSNDGNMIYLSENVSDYLGVSQMDMMGQSVYEYSHPCDHDELRECLSSKP AEQSDKRACSFFLRLKCTLTSKGRKVNLKSASYKVIHCTGRLTYIRNPVSNSSETSDAEH ESDDDGNERDIGASLVLLGCPIPHPSNIEIPLGRHTFLSKHSLSMKFTYTDEKLAEYLGW NSEELVGQSVFEFYHALDNLALDKCFKSLFSKGQCETVAYRFLGKRGGYAWVVTQATLIH CTKQQKPLSVVCVNYVLSGVEREDEVYSARQLAARDSEEAVKPEEKPAATSDVVQLPPLQ ATTKLRVRVQVNSKKLEDTALEGNQQQLSLPATKSKPATTGSSNRAKPLTVTSSIFRAAN NKAKKEPVQLQDGSRKDNTFPRPVQSTEKSFVGVQALKESLEESLKENNGPKRKQRCRQQ SAASRAPFVFQGKPAVEYDPETTVRQDRPHVVTRHLFASIATQQQQQQQQQDQITCRPPP QTATASIFAPRTEDMNKGFLTFSEDHPGLTMLKDEPEDLTHLAPTPGDVCVPLEDTPFLT DMLDEFILGSDNYCPLLSPDGTLAPELRSTDFTDSLKDAELGDTSRSKDLGESLADSDPF MYGDSPSSPCSIDPSAVSPPLTKYRQSPERSIDSLGSPTGGSGADGLSEDEMLMLGLNDS IGDDELEFRAPYIPMSDQDEALDLLISNDMVMWSPPQTTDHKSCLKWTLTEKEQRTTDSS LAQLLKMDQVVSRKYNDHGGGLVNPVQVLGQIPRKNINLDNCHWSSKMDRPTKRIHTASV DAGNDNKRIRCDESAKCSDHLSLEDHLLTKQQPSSRKSSNLGNSQLLRRLVSQQNVLRNN FANESYDSTVKGRQSVNRLEGNLNAEDGEGDSGGGGGVNDGGGRKVETNEGRCRRSGVEN GDAISQVSQRNPACNSVLMNLLVSGCDENLMDSRNVPSIYPKSLMSPLSVNLENHQMVPQ CPDSRGSSVSFDQLSPAARKQLSNNTFITGGESIESSPSSPMMPFDNFDYDTSMSASGLL QVEPDLFGSLLNRNLV NT seq 4191 nt NT seq  +upstreamnt  +downstreamnt atgatcgcgtcacgtgtccagccgatcgatacgctggccgataatgaacccggtcgttgc tccgattggatcgccagacagtcagacaacgcgagtttctatgacgatcaatccacctta ccgtcttgccaattcgctcgcgcacagattcaacccctttcagtcgacgattatcatcat tcccttaatccctgcgtggacagatcttacaatgaccaagacaagaatccgttcgaatcc cgctctgcggacgttggaacgtctaacgctcaagttttcctcccatgcatggaatcgtcg atccctatcgagctattgcaacctcaaccacagtctcaatgtagccagtttcgagactgc gcgcaaaatattacgcctaaaggcgctaagaattgccagctgggtccggtggacgtcgaa gatttggctctatgtttcgaatccgataagccacagacgaattgctcattacgagtttat cgaccgagtagttcgtcgaactttcgtcgtcgcgtaaaagcaacgagatacggtccctat ccaggttccttgacggacgacaaacaatttgaacagcctggattttcgttgatggatgtc tcgtccagtgatctaccgcgtatggattggttcggtgaacaattctgtggctacttttct caaccgtttgctttttgcaccgaagaacgatggcttcagtgtccagaaagcgatcgttgc cctctgtacgacaccacctactcgtatgggcaaaacgtcctgccaccgtgcctggatctg cgaaacgagtattaccaatacgagtacaacgaggacgaacagctactcgaggattatttg tgtaacgagaaaaggaaggaaaagtctcgtgatgctgcacgataccgtcggagcaaagag actgacattttctcggatctagctgccgctcttccattgccatcggaacaggcatctcac ttagataaggccagtgttatgagactagcaatcgcgtatctcaaagtgcgctcagtggtt gattcctttccaggcacactgaccaaatccgaaacattgaatcacatggacgaattattc tccaaagctctaaacgggttcatgttggtgctatccaacgatggtaacatgatctatctg tcggagaatgtcagtgattaccttggtgtttctcagatggacatgatgggtcagagcgtg tacgagtacagtcacccatgcgatcacgacgaattgcgggaatgcctgtcctcgaaaccg gctgagcaaagcgacaagcgtgcttgtagtttttttctacgacttaaatgcacattgacc agcaaagggaggaaggtcaatctaaagagcgcttcctacaaggtgattcattgtaccggt aggttaacatatatccgcaatccagtgtcgaattcatcggaaactagcgacgcggaacac gaaagcgacgatgatggaaatgaacgagacattggagcctcgttggtgctactgggatgt cccataccgcatcccagcaatatagagataccgttgggacggcacactttcctctcgaag cacagccttagtatgaagttcacatacactgacgaaaaattggctgaatatctgggttgg aacagcgaggagttagtgggacaatccgttttcgagttctatcacgccctcgataatttg gctctggataaatgttttaaatcactgttcagcaagggtcagtgtgagacagtggcctac agatttcttgggaaacgaggaggctacgcgtgggtcgtgacacaagccaccctgatccac tgcaccaaacagcaaaagccactttccgtcgtctgcgtgaattacgtcctaagcggcgtg gaacgcgaggatgaggtgtacagcgcgcggcagctcgcagcacgtgacagcgaggaggcc gtgaagccggaggagaaaccggctgccacgagcgacgttgtccaacttccacctcttcaa gctaccacgaagcttcgtgttcgagtgcaagtgaacagcaagaagctcgaggatacagcg ctcgaggggaaccagcaacaattatcgttacctgctacaaaatcgaaaccagcgactacc ggctcttccaatcgcgcgaaaccgttgacagtgaccagttcgatcttccgcgcggcgaac aacaaagcgaagaaggagcctgttcaacttcaggacggctcgcggaaggataacaccttc ccgagaccggtccagtctacagagaaatcgttcgtcggtgtacaggctttgaaagaatcg ctggaagagtcgctgaaggagaacaacgggccaaaacggaagcaacggtgccgccagcaa tctgctgctagccgcgctccgttcgtgttccagggcaaacccgcggtggaatacgatccg gagacaacggttcgtcaggacaggccacacgtcgttaccagacacctgttcgcttctatt gcgacgcaacaacaacaacaacaacaacagcaagaccagatcacctgcagaccaccgcca cagacagcgacagcgagtatcttcgctcctcgtaccgaggacatgaacaaaggcttcttg actttcagcgaggatcatccaggccttacgatgctgaaggacgaaccggaggatctaaca catctggcgcctacacctggcgacgtatgcgtccccctcgaagacacgcctttccttacg gacatgctcgacgagtttattcttggcagcgacaactattgtcccctactgagccccgat ggaaccctagcacctgaattacgctccacagatttcactgactctctcaaagatgccgag ttgggagacacctcgaggagcaaggatctaggggagtctctggccgatagcgatccgttc atgtacggagattcaccgagcagtccatgtagcatcgatcccagcgcggtttcaccgccg ctcaccaagtaccgtcaaagtccagaacgaagtatagattcgttaggtagcccgacagga ggtagcggtgcggacggtttatcggaggacgagatgttaatgttaggcctgaacgatagt ataggtgacgacgagttggaatttagagcaccttatatcccaatgtcggatcaggatgag gctctggatttgcttataagcaatgatatggttatgtggagtccgccacagacgacagat cacaaaagttgtctaaaatggacgttaacggaaaaggagcaacgaacgacagattctagt ttagcgcaattattgaaaatggatcaggtcgtctccagaaaatataacgaccatggagga ggtttggtgaatccagtacaagttctcggtcagatccctaggaagaatataaatctagat aactgccattggtcctccaaaatggacagaccaacgaagcgtattcacactgcctccgta gacgcagggaacgacaataagcgcatcagatgtgacgaatccgcgaaatgtagcgatcac cttagtctagaggatcacctgttaacaaagcagcaaccgtcttcgagaaaatcgtcgaac ttgggcaacagtcaactgttgcgtcgcctggtgtctcaacagaacgttctgcggaataat ttcgcgaacgaatcgtacgacagtacggtaaaaggtcgacagagcgttaatcgattagaa gggaatctgaatgcggaggatggcgaaggagacagtggtggcggaggtggagttaacgat ggcggaggaagaaaagtcgaaacgaacgaaggaaggtgtcgtcgaagcggcgtagaaaac ggcgacgcgatcagtcaggtctctcagcggaatccggcgtgcaacagcgtgctaatgaat ctcctggtatccggctgcgacgaaaacctaatggactcgcggaacgtgccgtccatatac cctaaaagcctgatgtctccactgtctgtgaacctggagaaccaccaaatggtgcctcaa tgtccggattccagagggtctagcgtatccttcgaccagctgagccccgctgcgagaaag caactatccaacaatacatttataactggaggagaatcaatcgagtcgtcgccatcctca ccgatgatgccattcgataattttgattatgatacgagtatgtcggctagtggtttgctt caagtggaaccggacctatttggaagtctactgaatcggaatctcgtttaa

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