Bombus bifarius (two-form bumblebee): 117206320
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Entry
117206320 CDS
T07537
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif04382
Cornified envelope formation
bbif04512
ECM-receptor interaction
bbif04518
Integrin signaling
bbif04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117206320
04518 Integrin signaling
117206320
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117206320
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117206320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbif04147
]
117206320
00536 Glycosaminoglycan binding proteins [BR:
bbif00536
]
117206320
Exosome [BR:
bbif04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117206320
Glycosaminoglycan binding proteins [BR:
bbif00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117206320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117206320
NCBI-ProteinID:
XP_033301441
UniProt:
A0A6P8LLS8
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIVGGQYNHTSWSYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDSDDYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQIPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGEQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGYSSGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSACCVPKCFA
EKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKMGIPGFSG
ISGVPGVQGPPGAPGLPGRDGCNGTDGEPGDAGRPGDTGPRGYPGPRGPKGDKGQSGFAG
RFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFE
GPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGERGEKGDTGERGSDGQKGEQGPIGD
HGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLSGRPGQKGEPGR
DGPMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPRGPIGPSG
GPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGP
KGMDGAPGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPG
SPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIG
PPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKG
PMGFEGFPGPKGVAGDRGFPGQDGIPGRPCVPGRKGEPGVSVKGEHGEPGRRGETGAKGE
PGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPP
GSIGAPGPVGPRGLPGPRGDKGNIGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKG
SPGLPGPPGQKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTG
PMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRG
LPGLQGRPGIEGAPGLKGERGEKGAPGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPG
TIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERG
LSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGI
DGLPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGD
RGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPVGNPGPPG
LPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGD
QGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLSGQEGPKGEKGDNCIPEPGLPGQK
GEPGYPGVSGIDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPTGKMGAIGFVGQKGDK
GLDCLEPPMGPKGDRGYPGPTGPPGSPGEKGASGQPGFPGSHGMKGAPGPQGPPGPVGLP
GLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVPVCDAGHI
QLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSDRSYWLST
TKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIGYSFVMHT
GAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQFQRPEKQ
TLKAGNLRSRISRCQVCIKNT
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatataaccacacatcatggtcgtacaatcctccgcctgttgtaccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggagg
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctatcaaggtcagaattacgatgatcggtacaacagataccctgatagcgatgac
tataatcagagaactgatgattccggcggatatcagactaattatggaggcttggatcaa
gaatcctacaaccaaggtcaagatcaaatcccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttatgaagactcttacggaagaggagaagccggagga
gaacaaagatccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagacccttacggacaacgcggatactcttcagggcaacgtggagga
tatggcgcggccggagattcggacaattatccgagcagttacacggttgtgccagttcca
ggatacaagccacaacgaaactgtaccggatcggcctgctgcgtgccaaaatgtttcgcg
gagaaaggttccagaggaccgccaggtgtaatggggccacagggacctaaaggtcaaaaa
ggatttcctggaacagaaggtcttttgggaccaaagggagaaaaaggtgatcctggtcct
caaggactacgcggtccgaaaggtgacagaggtaaaatgggtatacctggattctccggt
ataagtggtgttcctggagtacaaggtccacccggagctcctggtctacctggtcgtgat
ggctgcaatggaacagacggtgaacctggtgatgctggtcgtcctggagatacaggtcct
cgtggttatccaggtcctcgagggcccaagggagacaaaggtcaatcagggttcgccggt
aggttccccgtaggtcaaaagggagaaccgggtatagatggtgtcagaggacctccagga
caaccaggattacaaggagagcgtggatttcctggacctaagggtgatcgtggtccttat
ggtccgcctggtctacaaggaccaagaggagaaaagggaaacatgggtcttgcgttcgaa
ggtccgaaaggtgacaagggtcagaagggagagcaaggacctcctggatcgcctgcagtc
ggcggctttctacatccaggagaagaaatagcaggtccacagggagagcgtggtgaaaaa
ggagacacgggtgaaagagggtcggacggtcaaaaaggagaacagggaccaattggtgat
catggtattcctggtactgcaggtatgaaaggagaaaaaggtcttccaggcgcaccaggt
attcgtggacgggatggtttctctggacctccaggtccgcctggacgcaaaggtgatcga
ggttatgacggattagacggcctttcaggtcgtcctggacagaaaggagaaccaggtcga
gatggacctatgggtgttccaggcttacgaggaccacctggtccacctggaggtgggaaa
ggtacgccagggcctccagggccaaaaggacctcaaggttttccaggacccactggaccg
cgtggtgccgatggatatcccggagatccaggaccaagaggtcctattggaccatcagga
gggcctgggttagcaggtattcctggtccagagggtttaccaggagaaaaaggagcaaag
ggagaacctgggatcacaggattccctggaccaacaggtccccgtggatttgatggtccg
ccaggtttagcaggttcacgagggctgccaggagagaaaggagcgtcgattatgggcccc
aaaggaatggatggagcgcccggtagagatggcgagaaaggacaaaaaggagaacgcggt
tacgcaggaccgcgtggagttcctggcgacgtggatggtattccaggagcgcccggagaa
cctggtttaccaggagaaccgggaacgccagggaaaaacggcattccaggatttccagga
tcacctggtgagaagggagagataggagggcgttgtatagactgtctgccgggattacca
ggaatcaaaggtgatcgtggtttcgatggacaacctggacttcctggtccacgaggtccg
gctggagaacgaggattccccggagaacctggcagcgacggattacctggaccaattggg
ccaccagggcctccgggaaaagatggcattcctggtgcagcaggtccacaaggagaacct
ggtactccagcagtggttacggaaaacatgcttaaagtagaaaagggcgataaaggtgtg
agaggtccggtaggaagagatggtccacctggtcttcctggtccgcctggagaaaaaggt
cctatgggatttgaaggtttcccaggacccaagggtgttgctggagatcgcggattccct
ggtcaagatggtattcctggaagaccatgtgttcctggtcgaaaaggagaacctggtgtt
agtgtgaaaggagaacatggagaaccaggccgaagaggtgaaacgggtgcaaagggcgaa
cctggtccactaggagataaaggagaacctggtctgtgtccaattccggatgaattaatt
aaaggaattaaaggcgacagaggtgctcccggtgaaaaaggagagcctggtccacccgga
agggatgggttaagcggtgacaaaggtttacaaggtatttcgggcccacctggaccaccg
ggatcaattggtgcacctgggccagttggaccaagaggattaccaggtcctcgtggtgac
aagggtaatataggaccaatgggtttccctggggaacctggtcgtgaaggacccagaggg
ttcccaggcgctgcagggttgaaaggagcaaaaggtgaagttggtatctcggtcaagggc
agtcctggattgccaggaccaccgggacaaaagggagagaaaggtcttccaggaccacca
ggaaaggaaggtcctgatggtctgccgggtttgccaggattttccggagagaagggtgat
gcaggtattccaggcataggtggtttgcctggtgcgccaggagaaaagggagatactggt
ccgatgggacctccaggcccgcctggtgttgctggaattcctggtatagacggaaataaa
ggtgaaccgggattgccgggcgaggctggcaaaccaggactcccaggattcccaggtatc
aaaggtgatcgtggcgaaccgggtatcgatggatcgaaaggttacccaggaagacgtggt
ctacctggtttacaaggtagacctggtatagaaggtgcacctggtttgaaaggagaacga
ggtgaaaaaggcgcccctggtttccctggattacgtggaatggaaggaaaacctggccgc
cctggattaactggaccaaaaggagatataggtcatcctggtctgccaggtcttcctgga
actatcgggttccaaggacctaaaggtgatcaaggtttaccaggattgccaggacgcaaa
ggagaaccaggtctagtttctgagaaaggacagaaaggtgaaccaggaatgccaggtatc
cgtggtcctgttggtcctcctggtagagatggtattgacggagacaaaggggaacgtgga
ttgtcgtgtaattgtttagacggattgccaggtcttaagggagaacctggtctgccaggt
cgcgatggtttaccaggacctatagggctaaaaggtgacgctggagtaagaggtttccat
ggttctcaaggagatataggaccaatgggtccaccaggtgaacccggaacacctggaatc
gacggattaccaggcgagccaggtgacatcggtccaccgggtccacctggtttccctggt
ttggatggtgatgtgggagctccaggacatcctggcctcaacggtggcaaaggagaccgt
ggtttgccaggtcttgttggggaacctggtatccgtggtatgcctggagaaaaaggtgac
cggggacaacctggaccgacagttgcgatcaaaggtgagaaaggcgaaccaggtatgcca
ggattacgaggtgtagctggagagaaaggagatcgtggcgaggaaggtctagctggttat
gatggcgaaaaaggagataggggcacaccaggtccagttggaaacccaggtccacctggc
ctccctggacctaaaggtgaagaaggtccacgtggacctacgggaattgctggattaact
atcaagggtgagaagggtttaccaggtctgccaggaaagcacggacgagaaggagtacca
ggacgaccaggagagaagggagaacgaggattacctggtttaccaggacataaaggagat
cagggaccttatggacctgtcgggccacagggcgagaaaggagatatgggacttatgggt
tctcccggtttaccaggtcaagatggagctccaggtcatagaggactctcgggtcaagaa
ggtccaaaaggtgaaaaaggtgacaattgtataccagaaccaggtctgccgggacaaaag
ggagaaccaggatacccaggagtttccggaattgatggactccccggtgaaaaaggtgac
agaggttggcccggtctagagggtccacctggtctggatggagagaaaggtgaaagagga
ttcccaggtccaacgggaaaaatgggtgctattgggtttgttggtcagaagggtgacaag
ggtctcgactgcctcgaaccaccgatgggaccaaaaggagaccgtggttatcctggaccg
actggcccgccaggctcgccaggagagaaaggagcttcaggtcagccaggattcccagga
tcgcatggaatgaaaggtgcaccaggacctcaaggaccaccaggtccagttggattacca
ggactgcaaggacctgttggtgctcctggtttaccaggtcttcaaggacccgtgggtcat
ccgggtgaaccaggagaaccaggactaccatgcgaagctgcgcctgactaccttactggt
atcttgctagtaaaacacagtcaaactgacagagtgcctgtttgtgatgcaggacatatc
caactctgggaaggatacagtatgttatctacggatggcaatgaaagatcgcactcacaa
gatttaggtcatgccggctcgtgcgtgcgaaagttctcgacgatgccgttcctcttctgc
gacaccggcaacgtttgtaactatgcgagtcgtagcgatcgttcttactggttgtcgacc
actaaagcaattcccatgatgcctattgaggggacagcgatagaggaatacatctccaga
tgcgtggtttgcgaggttccagcgaatgtgatagccgtacacagccagtcattgaatatt
ccagattgtccacacggatggaccgggctttggatcggatacagttttgtcatgcatacg
ggtgccggtgcccagggtggaggacaatccttgtccagttccggatcctgtctggaagat
ttccgtacaacgccatttatcgaatgtaacgaagaacactgccattattactcgaacgag
atcagcttttggatgacgacgatagaggacaggcttcagttccaaaggcctgagaaacag
accttgaaggcaggcaacctcaggtcccgaataagtcgctgccaagtgtgtataaagaac
acgtaa
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