Bombus bifarius (two-form bumblebee): 117206335
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Entry
117206335 CDS
T07537
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117206335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbif03021
]
117206335
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117206335
Transcription machinery [BR:
bbif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117206335
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117206335
U7-dependent histone pre-mRNA processing factors
117206335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
117206335
NCBI-ProteinID:
XP_033301471
UniProt:
A0A6P8LLV4
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MSVKRKPETQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCTDAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
TPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSIYFSASLPVLKHLLTQI
AGSLEVVDDKKLRVFKNIDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKV
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKE
DETFQQIVQTAVTKLHQSLAPPCDTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaaaagaaagccagaaacacaagtgccagccgaagaaagtgatttattatcg
attagaccgcttggagctggccaagaagtcggaaggtcgtgtatcatgttggaatttaaa
ggcaaaaagattatgttagattgtggtatacatcctggcttatctggtatggatgcatta
ccatttgtggacttggtagaagcagatgagattgatttactgctaatttctcattttcat
ttggaccattgtggagccttaccatggtttttacaaaaaaccagttttaaaggacgatgt
tttatgacacacgccactaaagccatatatcgttggctcttgtctgactatatcaaagtt
agtaacattgcgacagagcaaatgttatacactgaatctgacctagaaactagtatggac
aaaatagaaactatcaatttccatgaagaaaaagatgtgtttggaatcaaattttgggcc
tataatgccggccatgtattaggtgctgctatgtttatgattgaaatagcaggtgttaaa
attttatatactggggattttagtcggcaagaagatagacatttgatggcagctgaaatt
ccaaatattcatccagatgttttaattactgaatctacttatggtacacatatacatgaa
aaaagggaagatcgtgaaggaagatttacaaatttagttcatgaaattgttaatagaggg
ggaagatgtttaataccagtgtttgcattaggcagagcacaggaacttctccttattttg
gatgaatattggagtcaacatcctgaacttcatgaaattcccatttattatgcttcttct
ttagcaaagaagtgtatggctgtttatcaaacttatgtaaatgcaatgaacgacaaaatt
agacggcaaatagctattaacaatccttttgtatttaaacatatctccaatttaaaagga
attgatcattttgaagatattggaccgtgtgtagtaatggcttctcctggtatgatgcaa
agtgggctatcaagggaattatttgaatcttggtgtacagatgcaaaaaatggagttata
attgctggttactgtgtagagggaacattggcaaaaactattttatcagaacctgaagag
attacaaccatgtctggacaaaagttaccattaaaaatgtctgttgactatatatcattt
tcagcacatacagattatcaacaaacttcagaattcatacgtattttaaaaccacctcat
gttgtacttgtgcatggggaacaaaatgaaatgggtagattaaaagcagcattgcaaaga
gaatatgaagatgatcctaatacaacaatggaaatacataatccaagaaatactgttgct
gtagaattatactttaggggggaaaaaactgccaaagtaatgggcacattagcaatggaa
acaccaaaaccagggcaaacattatctggggttttagtgaaaagaaatttcaattatcat
atgctagcaccttgcgacttatcaaaatatacggatatgagtatgagtcaagttattcaa
agacagagcatttatttttcagcatcattgccagtattaaaacatcttctaactcaaatt
gctggaagcttggaagttgtagatgataaaaaattacgtgtttttaaaaatattgatgtc
acaattgatggaaaaattgttactatggagtggatcgcaacacctgtaaatgatatgtac
gcagattctgttttgactgcaatattacaagctgagatgatggaacagccacccaaagta
ttaccagcacctacaaaaatggatcgaatgcattttaaagaatgtttgatagaaatgtta
caagaaatgtttggggaggactctgttcctaagatctttaaaggagaaaagctgtatgta
acagttgatgggaaaaaagcacatatagatttattaaatttagaagtcaccagtaaagaa
gatgaaacatttcaacaaatagtacaaacagcagtaacaaagttacaccaatctcttgca
cctccttgtgatacaatttaa
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