Bombus bifarius (two-form bumblebee): 117206367
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Entry
117206367 CDS
T07537
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117206367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117206367
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117206367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
117206367
NCBI-ProteinID:
XP_033301538
UniProt:
A0A6P8M1E6
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDTTEDCSGKCQALENENQQVNQLIPGYENFHDYVQEAFDAIKLGIKCANSLPTGSNFNY
YSCFPSFLKAKEENTKLIMDVMQHLLGLAGIKGNISNLDIEEKFDLLLETNDMLLDRANA
LMDKECGIAKNTEVELMVSSAKGQPDGINGSWNKKVCRSQDTENIQSVRLLAAKNIQRPQ
LTFKDKIDNSSKPWCPRIKDKPNSLKPLAIYLEEGENGEIFSHPYEYELDMFVPPNDQLK
KSVPKKYKPLEETLLVMIKDPSDMKLLIEDLKRYKEIAVDLEHHSYRSFQGITCLMQIST
GDTDYLIDTLSLRSELHELNEIFTKSTILKVFHGADLDIQWLQRDLSLYVVNMFDTHQAA
KQLNLPYLSLAYLLKHYCNVDPDKHFQMADWRIRPLPEKLIKYAREDTHYLLYIKDLLRN
ALIDVANGQINILKAVYDRSTEICKKTYIKPVWTEESCMIMYRKSQKMFNNKQLYALKEL
HKWRDQTARGEDDSIAYVLPNHMLLNIAETLPREMQGILACCDSIPPLVRQNLLKLHKII
LKAREQPLIKPIIEDDIRQRLTQRNPVNSSKMWMYSPHDIPSDMEARADLPCLLDENNII
EEQISNIAMKHAVTVFDSPTTSENEEAEMDEQESNRKKRFPFVSPFERYKRVIPMIAEQE
AQEREKLRQEEENRLKELKMKEDEMAESKNRVHEHFKRVSQMVPEGSVSDLPKKPSQTPL
SQMSGRKRKRDSNINKQDEVQDKKIKDDLSNPTPMLETKTTQYVKQESDEIERLNEEQNV
PESITKSRKQASSNETVNPLRTRKKGEKDGIIKELKKKGMMPSKTFDYKVVDFSTFQGGS
RNVSNQVNFEQTVKRKKEKTRKRKKQKLNI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatactacggaagattgcagtggcaaatgccaagcgttagaaaatgagaatcaacaa
gttaaccaattaatacctggatatgagaattttcacgattacgttcaggaagcattcgat
gccataaaacttgggattaaatgtgctaatagtttaccaactggatcaaatttcaattat
tactcgtgttttcccagttttctcaaagccaaggaggaaaatacaaaattgataatggac
gttatgcagcatttattgggattagctggcataaagggcaatatatcgaatcttgatatc
gaagagaagtttgatcttctattagaaacgaacgacatgcttttggaccgagccaatgcc
ttaatggacaaagaatgtggcatcgctaagaataccgaagtagaattgatggtgtcgagc
gcaaagggtcaaccagatggaattaacggttcgtggaacaaaaaagtttgtcgatcccaa
gacacagagaatattcaatctgttcgtttattagctgctaaaaatattcaaaggccgcag
ctaacgttcaaagacaaaattgacaatagctctaaaccctggtgtcctagaattaaagac
aaacccaattctttgaaacctttggctatttatttggaagaaggtgaaaatggcgaaatc
tttagtcatccttacgaatacgagctggatatgtttgttccccctaatgatcagttgaaa
aaatcggtaccaaaaaagtataaacccctggaagaaacgctattggtaatgatcaaagat
ccgtcggatatgaagttactgatagaagatctaaaaaggtacaaagaaattgctgtagat
ttggaacatcattcgtacagaagctttcaaggaatcacctgtttgatgcagatctcaacg
ggagatacagattacctgatagatactctgtcgttacgatccgaattacacgagctaaat
gaaatttttaccaagtctacgatactaaaagtttttcacggagcagatttagacattcag
tggcttcagagagacttatctctgtacgtagtgaatatgtttgatacgcatcaagcggcg
aaacaacttaacctgccgtacttaagtttagcatatttgctaaaacattactgcaatgta
gatcctgataaacattttcaaatggcagattggcgcataagacctttaccggagaaactt
ataaaatatgccagggaggatacgcattatttattgtacataaaggatttattaaggaac
gctttaatagacgttgctaatggacaaatcaatattttgaaagctgtatacgacagaagt
acagagatttgtaaaaagacgtatataaaaccagtatggacagaggaaagttgtatgatt
atgtatagaaagagccagaaaatgtttaataataaacagctttatgctctaaaagaattg
cataaatggagagatcaaactgccagaggggaagatgatagtattgcttacgtattgcca
aatcatatgttactgaacatagctgaaacattacctcgtgaaatgcaaggaattttggca
tgctgcgactctattcctcctttggttagacagaatttattaaaactacataaaataata
ttgaaggctagggaacagccgcttattaagccaatcattgaagatgatatcaggcaaaga
ttgacgcaaagaaatcctgttaacagttcaaaaatgtggatgtattcacctcacgatatt
cccagtgatatggaagcacgagctgacttaccatgcttgttagatgaaaacaacataata
gaagagcaaatttcgaatatcgcgatgaagcatgcagtgactgtgtttgacagcccaact
acgtctgagaatgaggaagcagaaatggacgagcaggaaagtaatagaaaaaagaggttt
cccttcgtaagtccgtttgaacgatacaaacgggttatacctatgatagcggaacaagaa
gcacaggaaagagaaaagctaagacaagaagaagaaaatcgtttgaaggaactaaaaatg
aaagaagatgaaatggcagagagtaaaaacagagttcacgaacattttaaacgtgtttct
caaatggtgccagaaggaagtgtgtcagatttaccaaaaaaaccatctcaaactccactg
agtcaaatgtcgggtcgtaaaagaaaacgagattcaaatattaacaaacaagatgaagta
caagacaaaaaaattaaagatgatttatcaaacccaactccgatgttagaaaccaaaact
actcaatatgtaaaacaagaatcagatgaaattgaacgtttaaatgaagagcaaaatgta
ccagaaagtattacaaaaagtcggaaacaagcatcgagtaatgaaactgttaatccgtta
cgcacaagaaaaaaaggagaaaaggacggtataatcaaggagttgaaaaagaaaggtatg
atgccatcaaaaacattcgactataaagtcgtagattttagtacttttcaaggaggtagt
agaaacgtatccaaccaagtaaactttgaacaaacagtgaagagaaaaaaagaaaaaaca
cgaaaaaggaagaagcaaaaattgaatatataa
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