Bombus bifarius (two-form bumblebee): 117206928
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Entry
117206928 CDS
T07537
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03030
DNA replication
bbif03410
Base excision repair
bbif03420
Nucleotide excision repair
bbif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117206928
03410 Base excision repair
117206928
03420 Nucleotide excision repair
117206928
03430 Mismatch repair
117206928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbif03032
]
117206928
03400 DNA repair and recombination proteins [BR:
bbif03400
]
117206928
DNA replication proteins [BR:
bbif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117206928
DNA repair and recombination proteins [BR:
bbif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117206928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
BRCT_2
Rad17
AAA_22
AAA_14
AAA_30
RuvB_N
PTCB-BRCT
RNA_helicase
AAA_assoc_2
AAA_19
AAA_33
AAA_5
AAA_7
AAA_16
AAA_11
Motif
Other DBs
NCBI-GeneID:
117206928
NCBI-ProteinID:
XP_033302523
UniProt:
A0A6P8M3W4
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MPRDIRSYFQTIKTNSNVAPAKATKKRIIISSDEDEDKSQSPRKRPKKTKLLEKKAIKSD
SNEDIKIISPADMFGKNPVNRQEATKISRQSLKQKAEEVPKISKKLQKKEAEGHNDDDFE
ATLRQLDTSDIEQRYLTEREKVNEDTSLHESSIENKEKTPIKNKEDVKKKTRSDKTNQEK
DNKEHEPKNKKHSNNILDEDIKHKGSENSSKFKHTKKSSKTSSAISKMEVEYLKEKNETS
PKKIDTSDVYEEKIEKKKQNAAMYQQYLQRGGARNPGSKEIPVGAEQCLTGLSFVITGVL
DSLEREEAEELIKQYGGRILHQISKKTDYVIVGDQAGPAKLSKATNLNIKKISEDDLLEL
IRTRPAGQSDNVTQPRTKSKERSKRKFAESSEESTPKKKKITVNEETKKVHSPHETESSK
REIEDSLKQELYNKDEKIKSSIEKKQNEYKESLVQDKKEIIDVKDIKIQMNTLQDISGNI
PVQALVEKYRPKTMKQILGQQGDKSNAKKIHTWLMNWHKNQSGQVKHTRPSPWAKDDNGA
FFKAALLSGPPGIGKTTTVQVVCNELGFDLIEFNASDTRSKKLLQEEVSELLSNTTIKNY
FKDVKSKPSSKHVLLMDEVDGMAGNEDRGGLQELITLIKSTDVPIVCICNDRNNPKMRTL
SNYTFDLRFPKPRLEQIRGAMKSMCFKENIQISNEDLDRLIESTNQDIRQVINHLALFVG
QTGSQEKNEKKHINKDLRLGPWDVVKKVFSVEEHKHMSISDKSNLFFHDYNIAPLFVQEN
YLMVIPQVPKNELLGRVAESAESIALGDVVEKSIRSNNAWSLLPIQAYYSSVIPGTAMSG
HIGGQINFPAWLGRNSKTGKLNRLMQEITLHARLATGASKEAINLDYIRPLRNTILRPLA
VGGIENVDTAIDVMNHYHLLREDLDSLVEISLWPGDRDPFQIIDSKVKAAFTRAYNKSSV
ALPYIVSGTSKKKVTSSIQEEGFLEEEEEEIDSDQNDDNLDADKMIKAKKAGINKNTESK
GKSTDKTEKKGKNSSDKSNKRGRGRGKAK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggatatacgatcctattttcaaactattaaaacaaattccaatgttgctcca
gcgaaagctaccaaaaaacgaattattatttcgtctgacgaagatgaggacaaatctcaa
tcgccacgtaaacggcccaagaagacaaagttattggagaagaaagctattaaatctgat
tccaatgaagatattaaaatcatttctcctgctgatatgtttggtaaaaatccagtaaac
agacaagaagcaactaagatatctagacagtcattaaagcagaaagctgaagaagtacct
aagatatctaaaaagttacaaaagaaggaggctgaaggtcataatgatgatgattttgaa
gctaccttacgtcagttagatacatctgatattgagcagagatatttaacagagagagag
aaagttaatgaagatacaagtttacatgaaagcagtattgaaaataaagaaaagacaccc
attaaaaataaagaggatgttaaaaagaaaacaagatctgataaaacaaatcaagaaaag
gataataaagaacatgaaccaaagaataaaaaacattctaataatattttagacgaggac
attaagcataaggggtctgaaaatagtagcaaatttaaacatacaaagaaatcttctaaa
acttcatctgctatttctaagatggaagtagaatatctgaaagaaaaaaacgaaacttct
cccaaaaagatagacacttctgatgtatatgaggaaaagattgaaaagaaaaaacaaaat
gctgcaatgtatcagcaatatcttcaaagaggaggagccagaaatccaggctcaaaagaa
attcctgttggtgctgaacagtgtctaacaggattaagttttgtaataactggcgttttg
gattctttagaaagagaagaagctgaagaacttattaaacaatatggtggacgaatttta
caccaaatttcaaagaagactgactatgttatagtaggtgaccaagctggtcctgcaaaa
ctgtcaaaggctaccaacttaaacataaaaaaaatatcagaagatgatttgcttgagctg
atacgtacaaggcctgcaggtcaaagtgataatgtaacacaacctcgtacaaaatcaaaa
gaaagatcaaagagaaaatttgcagaatctagcgaagagtcaacaccaaagaagaaaaaa
attactgtaaacgaggaaacgaaaaaagtacattcaccacatgaaaccgaaagtagtaaa
agagaaattgaggactcattaaaacaagaactttataataaggatgaaaaaataaaatct
tcaattgaaaagaaacagaatgaatataaagaatcgcttgtacaggataaaaaagaaata
attgatgtgaaagatataaaaatacaaatgaatactttgcaagatataagtgggaacata
ccagtgcaggcattggttgaaaaatataggccaaaaactatgaaacaaattttggggcaa
caaggggacaaaagtaatgctaagaaaatacacacttggttaatgaattggcataaaaat
caaagtggtcaagtgaaacatacaagacctagtccttgggcaaaagatgataatggagct
tttttcaaagctgctttgttatctggtcctcctggaattgggaaaaccacaactgtccaa
gttgtctgtaatgaattaggttttgatcttatagaatttaatgcatcagataccagaagc
aaaaaacttctgcaagaagaagtatcagaacttttatctaataccacaataaaaaattat
tttaaagatgttaaaagcaaaccatcatcgaaacacgtattgttaatggatgaagtagat
ggaatggctggtaacgaggatcgcggtggtctacaggaattaattactttgatcaaatca
actgatgtacctattgtttgtatttgcaatgatcgaaataatcccaaaatgagaacgctt
tctaattatacatttgaccttcgatttccaaaacctagattggaacaaattaggggtgcg
atgaaatctatgtgttttaaagaaaatattcaaatttcgaatgaagatctcgatcgttta
attgaatcaactaatcaggatattcgtcaagttataaatcatttggcattatttgttgga
caaactggttctcaggaaaaaaatgaaaagaaacatataaataaggatttgagattaggt
ccttgggatgttgtaaaaaaagtattttccgtagaagaacataaacatatgagtataagt
gacaaaagtaacttatttttccatgattacaatatagcaccattatttgtacaagaaaat
tacttgatggttatacctcaagtgccaaaaaatgaattgttaggaagggtagcagaaagt
gctgaaagtatagcattaggagatgtagttgaaaaatccataagaagtaataatgcttgg
tctcttttaccaatacaagcttattattcttctgtaatacctggaacagcaatgtctggt
cacattggtggtcaaattaattttccagcttggcttggacgtaattcaaaaactggtaaa
cttaatcgcttaatgcaggaaatcactttacatgcacgtttggctacgggtgcgagtaag
gaggctataaacttggactacattagacctcttagaaatactattctcagacctttagca
gttggaggtattgaaaatgtagatacagcaattgatgttatgaaccactatcatttactc
agagaagatctagattcattggtagaaatttctctatggcctggtgatcgtgatccgttt
caaattatagatagtaaggtgaaagctgcttttacaagagcatataataaaagttctgtg
gctctaccttatatagtgagtggaacatcaaagaaaaaagtaacatcaagtatacaagaa
gaaggtttcttagaagaggaggaagaagaaattgactctgatcaaaacgacgataacctt
gatgcagataagatgattaaggcaaagaaagctggtataaacaagaatactgaatcaaag
ggtaaaagtactgataaaactgagaagaaaggcaaaaatagtagtgataagtctaataaa
cgtggaagaggacgggggaaagcaaaataa
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