Bombus bifarius (two-form bumblebee): 117207477
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Entry
117207477 CDS
T07537
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117207477
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117207477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
117207477
NCBI-ProteinID:
XP_033303663
UniProt:
A0A6P8M6P4
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MSKSNIRKITVDPTKCNTDSRRPSVFERLGTKPAVTAGQNSSDYCRNWALNGSCSYGKNC
KYANTHTLISPSKRAKKDNAIASTAGLIEDPFKRLTSKIIKKPSHSPDLNLEEWNQTDLE
YEDEKVLERRRQLLQRELELQMKKDKEVHGKDKVRQKKKAMTSSSSSHTSSTSSSSSSSS
SEDSSSSSTSDSRKKIKKIKSKRHHSGSTDYDEDKERRRKLKLKRLGTKNEKPSVKKKRK
FENSSTKKEISARSAKKYSSSTTSKKHSSTPRTRSPAIQASTAVTSTTTAVLGSSVSVPH
HGTSSKVRERNRSESPKAVKARDMDKEDRHYKKVRDVDELSKDNAKNKPFDKVKEQDKEK
SRAIDEKIKTNERLKTKCKDKDIRSRTPPTSERSKHQHSKETISTKTRRSRTPEKSSRSK
RELTPPKAQDRQLSTNRSRDTEKKDRESHKSDKTKDREDIRKNEQNNKTRQVSNQEESHR
RIGKEFDDKTYLGEKTRQKSRERRDKEHTRDERGHSRLARDQRDARDKDKEDLQERCRER
PRERDRDRDRDRERDRERERDRDRDRDRDRDRDRDRDRDRDRDRDRDREKEPIKARDRDV
PPLVTTSLSLTTDKSSRYSRDKERIVVKDNAFEKNGTRERRSDRERERSETKALSDRDRT
SQRIDNRYDRNTVDKDTPARKAGVNSPRDRVDRFPRERSLDRTSLLDKGVHNAPPLSQAP
SLPAVQSSIASSSSSSAPPTLSSSRDNLIDRIDIGHYDRERHRRFSTRYDRNHTSEHDQS
RVTPTKVDRLIERRETSPRRTIEIDRNYNRNYGRLSEHWDEQDEASSHLDYRDHHIHEDD
RRKTVDGRRYDSPFDERRGIREERSRESRYVVQTTDRTSFDDHRHHHHHHRHPLYPGEKL
RSNTSIRDENVPNDDWDSHHRDVEHGRERAYGPVDWEEREWRVRGLWDSRDSLPRSEVHD
DDWNSRYDNSVSDWKSSDSRKWDNQSVHIRGHYRNDRSKELEIAESTSHNKRRTYNSSET
RDECTVHSSKQASLYGSMKEEPINKKLMELAEGKLSTTREKSTDTFQKKAVSKEKSETKE
TITSESKRTCIDESLQTLHTESDLSDISDDPDDILNMEDITDMDANKTRVTKKTPDTIQR
DGQLTTQEADLSSPKETIEETVFNTKGKDNTDAMSFRNMEDENMETMDFEEISDGELEED
IKTSGKGLGDALGVDWESLVKETQPRKSISCNQNSENRWQCKAILHRVGVSAKYAGEDVM
KKLTKKYGKDDHSELFFHNVAFMHTALARNRLLHDLNNDMLPTVDDFLYRNGNVNIDEDV
DYDLEVLRPCTALYEEAKCLLQQAV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatcaaacataaggaagataacggttgaccctacgaaatgtaatacagactct
cgtcgaccaagtgtatttgagaggttggggaccaaaccagcagttactgccggccaaaat
tcgtcggattattgtagaaactgggcactaaacggcagctgttcgtatggaaagaattgc
aaatatgcaaatactcacacattaataagtccgtccaagcgtgccaaaaaggataatgct
attgcaagtacagcaggacttattgaggatccgtttaaaaggcttacttctaagatcata
aaaaagccatctcatagccctgatttaaatttggaagagtggaatcaaacagatttggaa
tacgaggacgaaaaagtcttagaaagacgtagacagttgttacagcgtgaactagagcta
caaatgaagaaagataaagaggttcatgggaaagataaagtgagacaaaaaaaaaaggct
atgacttcttcttctagttctcatacttcaagtacatctagcagtagtagtagttctagc
agtgaagattcatcttctagttcaacatctgattcacgtaaaaaaattaaaaagattaaa
tctaaacggcatcatagtggatctactgactatgatgaagataaagaaagaagaaggaaa
ttaaaattgaaaaggcttggaacaaaaaatgaaaaaccatcagtgaagaaaaaacgtaag
tttgaaaatagttccacaaaaaaggagattagtgctagatctgcgaagaaatacagttca
tctacaacatcaaagaaacattcttccacacctcgtacaaggtcaccagcaatacaagct
tctacagcagtaacatcaacgacaactgcagtattaggttcctctgtatctgtgcctcat
catggaacatctagtaaagttagagagagaaatagaagcgaatcccccaaagcagtaaaa
gctagagatatggataaagaagatagacattacaaaaaagtgagagatgtagatgaatta
tctaaagataatgctaagaataaaccttttgataaagtcaaagaacaggacaaagaaaaa
agtcgtgcaatagacgaaaaaataaaaacaaacgaaagattaaagacgaaatgtaaggat
aaagatatacgttctagaacacctccgacatccgaaagatcgaaacatcaacattcaaaa
gaaacgatttcaacgaaaactcgccgtagtcgtacacctgaaaagtcatctagatccaaa
agagaactcacgccgccaaaagctcaagatagacagctttctacaaacagatctcgagat
acggaaaaaaaagatcgcgaatcacataaaagtgataaaactaaagacagggaggacata
agaaaaaatgaacaaaataataaaactagacaagtatcgaatcaagaagaaagccataga
aggattggcaaagagtttgatgataaaacttatttaggagaaaagacccgccaaaagagc
agagaacggcgtgataaagagcatacgagggatgaacgtgggcattcgaggcttgctcga
gatcaacgagatgctcgtgataaagacaaagaagatctacaagaacgttgtcgtgaacga
ccacgggaaagagatcgtgatcgagatagagatcgagaacgtgatcgtgagcgagagaga
gatagagatagagatcgcgatcgtgatagagatcgggatcgtgatagggatcgcgatcgc
gatcgagatcgagaccgtgacagagaaaaagaaccaataaaagcaagagatagagatgta
ccacctttagttacaacgtcgttaagtttaacaacggataaaagttcacgttatagtcgg
gataaagaacgaatagtggtgaaggataatgcctttgagaaaaatggaactcgagaacgt
agaagcgatagagaaagagaacgatccgaaacgaaagctctttctgatagggatagaaca
tctcagcgtattgataatagatacgatagaaatactgtagataaagatacaccagctcgt
aaagctggcgtaaattcacctagggatcgtgttgatcgctttccgcgagaaagatctttg
gatagaacatcgttgctcgataaaggtgtgcacaatgctccaccattgtcacaagctcct
tctttaccagccgttcagtcttctatagcatcttcatcgtcttcatccgcaccgcctacg
ttgtcaagttcgcgagataatttaattgacagaatagatatcgggcactatgatcgcgaa
agacacagacgatttagtacaagatatgatcgaaatcatacatctgaacacgatcaatca
cgcgttacaccaaccaaagttgatcgtttaatcgaaagacgcgagactagtccacgacga
acaattgaaatagacagaaactataatagaaactacgggcgtttatcagaacattgggac
gaacaggacgaagcgtcttcacatttagattatcgtgatcaccatattcatgaagatgat
agaagaaaaactgttgacggaaggagatatgatagtccgtttgatgaaagacgcggaatt
cgtgaagaaagatcccgggaatctagatatgtcgttcaaactactgatagaacttcattt
gatgatcatcgacatcatcatcatcatcacagacatccgctttatcctggagaaaagtta
aggagtaacacctccatacgggatgaaaatgttcctaacgatgattgggatagtcatcat
cgtgatgtagaacatggcagagaacgagcttacggacctgttgattgggaagaaagagaa
tggcgagtaagaggattatgggacagcagagatagccttcctcggtcagaagtgcatgat
gatgattggaattctcgatatgataattctgtgtcagattggaaatcaagtgattctcga
aaatgggataatcaatcagtgcatattcgaggccattatagaaacgatcgatctaaggaa
ttagaaatagcagaatccacatcacataataaaagacgaacttataacagttctgaaact
agagatgaatgtacagttcatagttctaaacaagcatctttatatggtagtatgaaagaa
gaacctattaataaaaagttaatggagcttgcagaaggtaaattatctacaactcgagag
aaatctacagatacttttcaaaagaaggctgtatcaaaagaaaaatccgaaacgaaagaa
actattacctctgaatcaaaacgtacttgcattgatgagtctttgcagacacttcatact
gaaagcgatctcagtgatattagtgatgatccagatgacatattaaatatggaagatatc
acagatatggatgcaaataaaacacgagtaacaaagaaaactcctgatactatacaacga
gatggtcagttaacaactcaagaagcagacctctcatctccaaaagaaactatagaggaa
acagtctttaacacaaaagggaaagataataccgatgcaatgtcctttagaaatatggaa
gacgaaaatatggaaactatggactttgaagaaatttctgacggtgaattagaagaggac
attaaaacgagtggtaaaggtttaggcgatgctttaggagttgactgggaaagtcttgtt
aaagaaacacaacctcgcaaatctatatcatgcaatcagaattcagaaaatcgctggcag
tgcaaagcaattctgcatagagttggcgtctctgcgaaatacgcaggcgaagatgtaatg
aagaaactgacaaaaaaatatggaaaagacgatcattcagaattgtttttccataatgtt
gcatttatgcatacagcacttgcacgaaatcgtttgctacatgacttaaacaatgatatg
ctacctacagtggatgattttctgtacaggaatggtaatgtaaatattgatgaggacgtg
gattacgatttagaagttttaagaccttgtacagctttatatgaagaagcaaaatgttta
ttacaacaggcagtataa
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