Bombus bifarius (two-form bumblebee): 117207931
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Entry
117207931 CDS
T07537
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117207931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117207931
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117207931
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117207931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Baculo_PEP_C
V-SNARE
Motif
Other DBs
NCBI-GeneID:
117207931
NCBI-ProteinID:
XP_033304544
UniProt:
A0A6P8M1E2
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVSNWLANSIDALNLQLDTFESEIESLLAGKKKRLDKDKQDRMDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGSTATIKSNLLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHTNSQAIHSTSSKTSSHSSENGLLSSSSASSVTSNVPQTTSQQHSNPVPIQTTHVL
HNQQNQNHSSETEMTTPIPPSSSPQSSVSSRSSPLPANSCSPAPSTANGLIPKLPDGMSS
LKSIAQQVIVRAGLDIPPSESNRNIFDTAKANNNNSKVTVDTHIPPILSVAPLGPVPLQK
EHQLQFQLLEAAHYHLPVPSDSERLRYYLPRNRCDTPSYYTQSQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggag
ggtgtagagacatttgaagatatttggcaaaaggttcataatgctacaaacagcaatcag
aaggagaaatatgaagcagatctcaagaaagaaatcaaaaaacttcaaaggttacgtgat
cagattaaaacctggcttgcatcaggtgaaattaaggataaaagtacgcttcttgaatat
agaaagttaattgaaactcaaatggaaaggtttaaagttgtggagagagagacgaaaaca
aaagcttattcgaaagaaggattaggagctgctcaaaaacttgatccagctcaaaaagaa
cgagaagaagttagcaattggcttgcaaattcaatagacgctttaaatcttcagctggat
acatttgaatccgagatagaatcattactcgcaggaaagaaaaaaagattagataaagat
aagcaggataggatggatgaattaaaagcaaaacttgataaacatcgttaccatatccgt
aaattggaaacattgttacgcatgttggacaatatgtctgttgaagttaacactattaag
aggataaaagatgatgtagagtattatatcgaatcctcgcaggaacctgattttgaggaa
aatgaatatatctatgatgatattattggtctcgatgaagttgaactgtctggagttggt
attccctcatcagcaactacagatagtaataatagcaacgaaactggaggtacaccaacc
tcaactaactctggtacttcacccataccatcacctccattgagttctaccatgcataac
cattcaagtgatagttctacggataatgacaaaaaaacgaagcctgtgaaaccaacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaagcactgccaccata
aaatcgaatttattatcaagcagcactccaagcaagaccattcccatgacacctagccat
agctcgcctagttctacaagtaatcacattgctacaactaatgctggcaattttgctaca
gtagctgcatcacatactaattcacaagccatccattctacctctagtaagacatcttct
catagcagtgaaaatggtttattgtcatcatcgtctgcgtctagtgttacctcgaatgtg
ccacaaacaacctcgcagcagcacagtaatccagtgcccatacagacgacacacgtgttg
cataatcaacaaaatcagaatcacagcagcgaaactgaaatgacaacgccgatcccacca
tcttcttcgccacagtcgtcagtcagcagtagatcttcacctttgcctgcaaattcctgc
tcgccagcgccatccactgccaatggtctcatccctaagcttcctgatggcatgtcctct
ttgaaatctatagcccaacaagtaattgtccgagcaggtttggacataccgccgtccgag
tcgaacagaaacatctttgacactgctaaggcgaacaataataacagcaaagtcaccgtg
gatacacacattcctcctattcttagcgttgcgcctctcgggccagtacctcttcagaaa
gaacaccagttgcagttccagttgttggaggccgcccactaccatctgcctgttccgtct
gattctgaacgtttacgatattatttaccaagaaataggtgtgacacaccttcttattat
acacagagtcaacttccccattcggatactgtggagttcttccaacgtctttcaacggaa
acgttgttcttcatattttactacatggaaggttctaaaggccagtacctggctgcgaaa
gctctaaagaaacaaagttggaggtttcatacaaaatatatgatgtggtttcagaggcac
gaagaacccaaagtgatcaacgaggaatatgaacagggaacctacatttatttcgattat
gaaaaatggggacaaagaaaaaaggaaggttttacatttgagtacaagtacttagaggac
agagatctgaattaa
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