Bombus bifarius (two-form bumblebee): 117208093
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Entry
117208093 CDS
T07537
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117208093
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
117208093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
DUF4158
RuvA_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
117208093
NCBI-ProteinID:
XP_033304839
UniProt:
A0A6P8M278
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MICIHNSICTDSRRSLDAKGYDRLQFVEGDMTVAGKKYVDCTVLETESIADAEDSSYDSD
YEAEDSVGSTNIHSQVELQVSTSSHSDVSRTASDTLAAEFAEYVTVQGSPPVQSPGYTAR
VEFALKLGYTERLVQTALEKLGPDPEQNELLAELIKLGASCSQKSVDTPEESDNVADTDL
MSNENSGCSSSLRSVVIDGSNVAMSHGNKEIFSCRGIKICVDWFKARGHKEITVFVPKWR
KETSRIDNPIADQEILGELERDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRKVVEERILMYTFVNDRFMPPDDPLGRSGPTLDNFLRTFPKKSDPAP
PCPYAKKCTYGNKCKFRHPERGLHPQKSVTEKLVEHVQKQLQVRGSSPNVFLSSNISTNA
FQHQPLCKTKSTVTTSIQPLPSVTKSRSAENVTLDQPMNSTIHGLQVPPTTSSQGYRSSC
RSTGRLNKPEAEPPNIHKKLQRQLTLNPVYDPRLHQLRQYQQASQTSSLSQQTAITSSTA
QHRALSRHSSNESAYRAGMNWDRSEGGQCHQHVTRIASAPDSYQAWLSNNSNLAVPSGSS
QRLGASDSQLNVPTSPLYSAMPTDMLRDFLDTRTKIHYHLANIFPEEHVRTAMLIHPFET
DPIEICVAILKMYPQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtatacataatagtatttgtacggattcgagaaggtctttggacgcgaaagga
tacgatcgattacaattcgtggaaggagatatgaccgtcgccggaaagaaatacgtagat
tgtaccgtcctggaaactgaaagtattgctgacgcagaagattcttcttacgatagcgac
tacgaagctgaagattcagtgggatctacgaatattcattcacaagtggaattgcaggta
tctacgtcaagtcattcagatgtgtcccggaccgcctcagatacgttggctgctgaattt
gcagaatatgttacagtgcaaggaagtccaccggttcagagtccagggtacactgcccga
gtagaattcgcccttaagcttggctacacggaacgtttagttcaaacagcgctggaaaaa
ttgggtccagatccggaacaaaacgaacttttggctgagttgataaaactcggtgctagc
tgttctcaaaaatcagttgatacgccagaggagtctgataacgtcgcggacactgattta
atgtccaatgaaaacagcggatgctctagcagtctcagatctgttgtaattgatggaagc
aatgtggcgatgagtcatggaaacaaggaaatattttcttgtagaggaattaaaatttgc
gtggattggtttaaagctcgagggcacaaagaaattaccgtatttgtgccgaagtggaga
aaggaaacttccaggattgataatccgatcgccgaccaagaaattttgggagaattggaa
agggaccgtttgttggtttttactccatccagattagttggtgggaaaagaatggtttgt
tacgatgatcgctatattttgaaactagcagcggagatcgatggtattgttgtcagcaat
gataattacagagatttggcacaggaaaatccggaatttcgaaaagttgtggaagaaaga
attttgatgtatactttcgtaaatgatcgctttatgccaccagacgatccactaggtaga
agcggtcccactttagacaattttttgagaacttttcccaaaaaatctgatccagcacca
ccttgtccatacgcgaagaaatgcacttatggaaataagtgtaaatttcgacatccagaa
agaggtcttcatcctcaaaaatcagttacagagaagttagtggaacatgtacaaaagcag
cttcaagtaagaggttcaagtccaaatgtatttttatccagcaatatatcgaccaatgcg
tttcaacatcaaccgctttgtaaaaccaaatcaacggtaactaccagtatccaaccatta
ccttcagttacaaaaagcagatctgcagaaaatgtcacgcttgatcaaccaatgaattcc
acgatacatggtttacaagtgccacctaccacaagttctcaaggttatcgttcttcctgt
cgatcgacaggaagattgaataaaccagaagcagagccaccaaatatacataagaaactg
cagaggcagttaactttaaatccagtgtatgatcctcgacttcaccagctgagacaatac
cagcaagcatctcaaacaagttcattatcacaacaaactgcgataacatcttctacagca
cagcacagagccttaagtagacattctagtaacgaatcagcctacagagctggcatgaat
tgggatcgttctgaaggagggcagtgtcatcaacacgtaacacgtattgcttcggcgcct
gattcttaccaagcttggttatcaaataattcaaacttggctgtaccatcaggatcgagt
caacggctgggtgcttcagattcacagttaaatgtccctacatctcccttgtattcggct
atgccgacggatatgttaagggattttctcgataccagaacaaaaatacattaccatttg
gcaaatatctttcccgaagaacacgtgagaactgctatgctaattcatccatttgaaaca
gatccaatagaaatctgtgttgctattttgaaaatgtatccccaataa
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