Bombus bifarius (two-form bumblebee): 117210399
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Entry
117210399 CDS
T07537
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03430
Mismatch repair
bbif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117210399
03460 Fanconi anemia pathway
117210399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbif03400
]
117210399
DNA repair and recombination proteins [BR:
bbif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117210399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
117210399
NCBI-ProteinID:
XP_033309281
UniProt:
A0A6P8M6R2
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MDEPISSSEKSKKINVISKQTIHQICSGQVIFDLATAVKELVENSLDSGATLIDIKLKDY
GKTCISVSDNGSGVLEQDFEGLGLKHYTSKLREFSDLTEVSTFGFRGEALSSLCSLADLS
IVTRHSTSEHGFKLQFDHNGALQKKEPCAREIGTTVHIKDIFKCLSVRAKEFQRNLKKEY
IRAIQVLYSYCLVSTNTKITCSNCVSDKSPNLVINTVSPSNILSNINLIFGKKSSNGLIK
IELLPPDEATLQEYNLSSNVVVDFEWDCYISSCDHDVGRSAPDRQFFYVNGRPCDLTKVS
KLINQIYHKYNNKQYPFIFLNLKLNKHSTDINVTPNKRIIFCTQENLILATLKYNLSSRW
DKLQGNLTVNPVPELSFGVKRTISPTNADRPIKRFHNLNTISKIEHTEKQNIQHINKNKT
IQYDNDNDNVQNNITNKTKILDSVQMTISILAIKQQLQEKQNLLSKCVISSTRIKFKAQM
DQNSNAESELKKQLTKDSFFQMEIIGQFNLGFIITRLKEDLFIIDQHATDEKYRFEKLNN
ETQLRTQKLIIPKFLNISPLNETILIEHQKTFEDNGFFFKIDSEGEQNKLKNVLIVISES
GHRVQLTGIPVSGHWQFGQDDIEELIFLIREGGIENQKNSTFRPSRVRQMLASKACRKAV
MIGTALNNNDMHKLITQMAEMENPWNCPHGRPTIRHLLSLNLIYK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaccaatatcatcgtcggaaaaatcgaagaagattaatgttataagtaaacaa
acaattcatcaaatttgttctggtcaggtaatatttgatcttgcaactgctgtcaaagaa
ctagtagaaaatagtttagatagtggtgctacattaattgatattaaattgaaagattat
ggaaagacatgtatcagcgtcagtgataatggaagtggtgttttagaacaagattttgaa
ggattaggactgaagcattatacttctaaacttcgagaattctcagatttaacagaagtg
agcacgtttggatttcgaggagaagctcttagttcactttgttctttagctgacttaagt
attgttacaagacattctacaagcgaacatggttttaaattacaatttgatcacaatggt
gcactgcaaaaaaaggaaccatgtgcaagagaaataggaactactgtgcatataaaagat
atatttaagtgcctttctgttagagcaaaagaatttcaaagaaatcttaaaaaggaatat
attcgagctattcaagtactatatagctattgcttagtttctactaatacaaaaataaca
tgctccaattgtgtatcagacaaatcccctaatcttgtaatcaatactgttagtcccagt
aatattttaagcaatattaatttaatatttggcaaaaaatcttcaaatggacttattaaa
attgaactgttacctcctgatgaagcaacattgcaagaatataacttatcaagtaatgta
gttgtggattttgaatgggattgctacattagcagctgtgatcatgatgttggacgttct
gctcctgatagacaatttttttatgtaaatggtcgaccatgtgatctgacaaaagtcagt
aaattaataaatcaaatttatcataaatataataataaacaatatccatttattttttta
aatttgaagttaaataaacactcaactgatattaacgtaactccaaataagagaatcatc
ttctgtacacaagaaaatttaattttagcaactttaaaatataatttatcatctagatgg
gacaaattacaaggaaatttgactgtaaaccctgtaccagaattaagttttggtgtaaaa
agaacaatttcacctacaaatgctgatcgaccaatcaaaagatttcacaatttaaataca
atatcaaaaatagaacatacagaaaaacaaaatatacaacacattaataaaaataagact
attcaatatgataatgataatgataatgtacaaaataatataacaaataaaacaaaaata
ttagatagcgtacaaatgacaattagcattctggcaataaaacaacaacttcaagaaaag
caaaatcttttatcaaaatgtgtgatttcaagtacacggatcaagtttaaggcacagatg
gatcaaaattcaaatgctgaaagtgaattaaaaaaacaattaacaaaagattcttttttc
cagatggaaattataggtcagtttaatcttggttttataataacacgtttgaaagaagat
cttttcattattgatcaacatgctaccgatgaaaaatatcgttttgagaagcttaataat
gaaactcaattacgaacccaaaaattaattattcctaaatttttaaatatttctccactt
aatgagacaatattaattgaacatcaaaaaacgtttgaagataatggttttttttttaaa
atagattctgaaggtgaacaaaataaactaaaaaatgttttaattgtcataagtgaatct
ggtcatcgtgtgcaacttacaggtataccagtaagtggtcattggcaatttggacaagat
gacatcgaagaattgatttttcttattagagaaggtggtatagaaaaccaaaaaaatagt
acatttcgcccaagtcgtgtaagacaaatgctagcatcaaaagcttgtcgcaaggcagtt
atgataggtacggctcttaataacaatgacatgcataaattaattactcaaatggcagaa
atggaaaatccttggaattgccctcatggtagaccgacaataagacatctgttatcattg
aatcttatatataaataa
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