KEGG   Bombus bifarius (two-form bumblebee): 117211717
Entry
117211717         CDS       T07537                                 
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
  KO
K12856  pre-mRNA-processing factor 8
Organism
bbif  Bombus bifarius (two-form bumblebee)
Pathway
bbif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117211717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbif03041]
    117211717
Spliceosome [BR:bbif03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    117211717
 Complex C
   U5 SnRNP specific factors
    117211717
SSDB
Motif
Pfam: PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg PROCT RRM_4 JAB
Other DBs
NCBI-GeneID: 117211717
NCBI-ProteinID: XP_033311791
UniProt: A0A6P8NB05
LinkDB
Position
Unknown
AA seq 2374 aa
MSIPPYLLGPNPWATMMAQQQAHAQLAAAQAHAQAAAHAQAAHHAHMQAIAGPPLPQMPK
QPEVLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEHMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVY
IAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEED
ESVALWFYEHKPLVGTKHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDHNFFYLFDPK
SFFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYN
NMPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTVEPQIEDDEDFVLP
EEVQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRHPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRTFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKF
EKLYEKIDLTLLNRVLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIA
QYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRF
SADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEIT
KERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSR
PSLLADSKDLMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGL
LIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILR
ALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSN
YETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLR
AQIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQ
PNELPQLSPQDISTHARIMAENPIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQN
TDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANP
KEFYHEIHRPAHFLNFSSLEDGEGVGADREDVFA
NT seq 7125 nt   +upstreamnt  +downstreamnt
atgtcgattccaccatatttattgggcccaaacccttgggccacgatgatggctcaacaa
caggctcatgctcagttagctgcagctcaggctcatgctcaagcagctgcacatgcacaa
gctgcacatcatgctcatatgcaagcaatagctggacccccattgccacaaatgcctaaa
caacctgaagttttgtcagaagataaacttcaagaaaaagctcaaaaatggcagcaactt
caatcaaaaagatttgcagagaaaagaaagtttggttttgtggatgctcaaaaagaacat
atgcccccggaacatataagaaaaattattagagatcatggagacatgagcagtcggaaa
tatagacatgataaacgtgtttatttaggagcattaaaatacatgcctcatgcagttatg
aaacttctagaaaatatgcctatgccttgggaacaaattcgagatgtaaaggtgctgtat
catatcacaggtgcaattacatttgtgaatgaaattccttgggttattgaacctgtatat
attgcacaatggggtacaatgtggattatgatgaggagagaaaaaagggatcgtaggcat
ttcaaaagaatgaggtttccgcccttcgatgacgaagaacctccgttggattacgcagac
aacgttttggatgtagaaccattggaagctattcaaattgaattggattcagaggaggat
gaatccgtggcattatggttctatgaacataaaccacttgttgggacaaaacacgtaaat
ggatctacttaccgaaggtggaatttgactttaccacaaatggcgactttatatcgttta
gctaatcaattattgacggatttggttgaccataactttttttatctctttgacccgaag
tcgttttttactgcgaaggcattaaatatggctataccaggtggaccaaaatttgaacca
ttggtgaaagattcaaatgcggctgatgaagattggaatgagtttaatgatattaataaa
attattattagacagcctataagaacagaataccgcattgcgtttccttatttatataac
aacatgccacattttgtacatttatcgtggtatcacgcaccaaatgttgtttatataaaa
accgaagatcctgacttacctgcattttattttgatcccttgattaaccctatttctcac
agaaattccctcaagactgtggaaccacaaatcgaagatgacgaagattttgtgcttcct
gaagaagtgcaacctttccttcaagaaactccattatatacagacaacacagcaaatggt
atagctttattatgggcaccaaggccatttaatacccgttccggcagaacaagaagggcc
attgacattcctctagtgaaatcttggtatagagaacattgtccaccaggacaacctgtt
aaagttcgagttagttatcaaaagttgttgaaatactttgtgttgaatgcactgaaacac
agacatcctaaaccacaaaagaaacgttatttgttccggtcgttcaaatccacgaaattt
ttccaaacaactacaattgattgggtcgaagctggtttacaagtctgtagacaaggatat
aacatgttaaatttactaattcacagaaaaaatttgaattatcttcatttagattacaat
tttaacctgaaaccagtaaaaactctaacgacgaaagaaagaaagaaatctagatttgga
aatgctttccatttgtgtcgtgagattctccgtttgacgaaattgatcatcgattctcac
gtacaatatcgtttgaataatgttgatgcatttcaactcgcggatggtttgcaatatatt
tttgcacacgttggtcagttaactggaatgtatcggtataaatataaactaatgcgacaa
atcaggatgtgcaaagacttaaaacatttaatttattatcgctttaatacgggtcctgtc
gggaaaggtcctggatgtggattctgggcacctggctggagagtatggcttttctttatg
aggggtattactccattattggaaagatggttagggaatttgttgtctaggcaattcgaa
ggtcgccattcaaagggagtcgcgaaaactgtaacgaaacagcgagtagagtcgcatttt
gatcttgagctaagagcatcagtgatgcacgacattgtagatatgatgccagagggaatc
aaacagaataaagcccgaacaatacttcagcatcttagcgaggcgtggagatgttggaag
gctaatattccgtggaaggttccgggattaccaataccgatcgaaaatatgattcttcgt
tatgttaaaatgaaggcagattggtggaccaatactgcgcattataatcgagaacgtatt
agacgtggtgctaccgtggataaaactgtttgtaaaaagaatcttggacgtctcacccga
ctttatctgaaagccgaacaagaacgacagcataattatttgaaggatggtccgtatatt
tccccagaggaagctgtagctatatatactacaactgtacattggttggaatcgagaaga
tttgctcctatacctttcccaccattgtcttataaacatgacaccaagcttttgatatta
gctttggaacgattaaaggaagcatatagtgtcaaatcgaggcttaatcaaagtcaacgc
gaagaactcggtttgatagaacaagcatatgacaatcctcatgaagcactgtctagaatt
aaacgtcatcttctcacccaaagaacgttcaaagaggtgggaatagaattcatggatctt
tatagtcatctgattcccgtttacgacgtcgaaccgcttgaaaaaattacggatgcctat
ttagatcaatacttgtggtatgaagcagataagcgaagattatttccaccatgggttaaa
ccttcagatacagaaccacctcctctattggtatataaatggtgtcagggtatcaataat
ctacaagatgtttgggatgttagcgaaggggaatgtaatgtattgttggaatcaaaattc
gagaaactgtatgaaaaaatcgatttgacgttattgaatagagtgcttcgattgatcgtt
gatcataacatagccgattatatgactgcaaagaataacgttgtcataaattacaaggat
atgaatcatactaacagttatggaataattagaggattacaatttgcgtcttttatagcg
caatattatggtctggtattagacttgttggttcttggattacaaagagctagtgaaatg
gctggcccaccccaaatgccaaatgattttctaacttttcaagacgtagcttcagaaaca
gcacatcctattaggttatattgcagatatgtagatagaatacatttgtttctgaggttt
tctgccgatgaagcgagagatctaattcagagatatttaacggagcatccagatcctaat
aatgaaaatatcgttggttataataataaaaagtgttggccccgagatgcgcgaatgcgt
cttatgaagcatgacgttaatttaggtcgcgctgtattttgggatattaaaaatcgttta
ccccgttccacgactacgatacaatgggaaaatagttttgttagtgtatatagtaaagat
aatcctaatttgttatttaatatgagtggatttgagtgcagaattttgccaaaatgtaga
actacgcacgaggagttcacgcatagggatggtgtgtggaatttacaaaacgaaattaca
aaagaaagaacggctcagtgtttcttgagagtcgatgatgaaagtctgcaacgatttcat
aacagagttaggcaaatccttatggcttctggatccacaaccttcacgaagatcgttaac
aaatggaatacagctttaattggactcatgacctacttccgcgaagctgtggtgaacaca
caagaacttctagatttattggttaaatgcgaaaataaaattcaaacgcgtatcaagatt
ggtcttaattcaaaaatgccttcgcgatttccaccggtagtgttttatacaccgaaggaa
ttgggtgggcttggaatgctttcgatgggacatgtacttatacctcagtcggatttaaga
tggtcgaaacaaaccgacgttggtattacgcattttcgttcaggcatgagtcacgatgaa
gatcaattaattccaaacttatatcggtacattcaaccctgggaatccgagtttatagat
tcccaacgagtatgggcggaatatgcgttgaagcgacaagaagccaatgcacaaaatcgt
agacttactttggaagatcttgaagatagttgggatcgtggtatccctagaataaataca
ctgttccagaaagacagacacactcttgcctacgataagggttggagaatacgtacagaa
tttaaacagtatcaggtcttaaaacaaaatccattctggtggacccatcaacgtcatgat
ggtaaattatggaatttaaataattaccgaacagatatgatacaggctcttggcggtgta
gagggtattttggaacatactctctttaaagggacatacttcccaacatgggaaggtctc
ttttgggagaaagcatctggattcgaagaatctatgaaatataagaaactgactaacgct
caaaggtctggtttaaatcaaattccaaatcgtcgattcactttatggtggtcaccaact
attaacagagcaaacgtgtacgttggttttcaggtacaactggatttaacaggaatattt
atgcatggtaaaattccaacgctaaagatttcgctaattcaaatatttcgtgctcacttg
tggcaaaaagtacacgaatcgatagtgatggatctttgtcaagttttcgatcaagaattg
gatgcattggaaatcgaaactgttcaaaaagagaccattcatcctagaaaatcgtacaag
atgaattcttcctgcgccgatattttgcttttctctgcatataagtggaatgtctctagg
ccatcgctactcgctgattcaaaagatcttatggataatactaccacacaaaaatattgg
atagatgtacagcttagatggggagattatgattctcacgatattgaacgatatgctagg
gccaaatttttagattacacaacagacaatatgtctatttatccatcaccaacagggcta
ttaattgctatcgatttggcttataatttacatagcgcctatggtaactggttcccagga
tgtaagcctcttatacagcaagcaatggcaaaaataatgaaggctaacccggctttatac
gtattgagagaacgcattcgaaaagcattgcaactttattcatcggaacctacagaacca
tatctatcttcacaaaattatggggaactcttttcaaatcaaattatttggtttgtcgat
gatactaacgtttaccgtgttacaattcataaaacatttgaaggtaatttaacgacaaag
cctataaatggagctatcttcatttttaatcctcggactggccaattatttttaaaaatt
attcatacttctgtttgggctggtcaaaagcgtttaggtcagttggcaaaatggaaaact
gctgaagaagtagctgcacttattcgatctttaccggttgaagaacaacctaagcagatt
atagtaacgagaaagggaatgttggatcccttggaagtgcatttactcgatttcccgaac
attgttataaaaggatcggagctccaattaccattccaggcttgtttgaaagtcgaaaag
tttggtgacttaatattgaaggcaacagaacctcaaatggtgttatttaacttgtatgat
gattggttgaaaactatttcatcgtacacggctttctcacgtttgattcttatccttcgc
gcattacatgtcaacactgagagaacaaaggttgttttaaaacctgacaagacaaccata
acagaaccacatcatatatggccttctttaacagatgatgaatggattaaagtcgaagta
caattaaaagatcttattttagcagattatggtaaaaagaacaatgtaaacgttgcatcg
ctgacacagtcagaaattcgagatatcattttgggtatggaaattagtgcaccatctgca
caacgtcaacaaatcgctgaaatagaaaagcaaacaaaagaacaatcgcagcttacagcg
acaactacacgaacagtaaataaacacggggacgaaattattacagcaacaacttctaat
tacgaaacgcaaacgtttagttctaagactgaatggcgagtaagagcaatttcagctact
aatttgcatcttcggaccaatcatatatatgtatcgtctgatgacattaaggagactggt
tacacttatattttgccaaagaatgttcttaagaaatttgttaccatttcggacttgaga
gcgcagatcgcggggtatttatatgggattagtccaccagataatccacaagttaaagaa
atacgatgtatagttatggctccacaatggggtacccatcaaactgttcatttgcctaat
acacttccgaatcatcaatatctcaaagagatggagcctcttggttggattcatactcaa
cctaacgagttgccacaattgtcaccgcaggatatatctacgcatgctcgaataatggca
gaaaatccaatttgggatggagaaaaaactatcgttattacttgtagttttacgccagga
tcttgttctcttacggcatacaaattaacacctagtggcttcgaatggggaaagcaaaat
accgacaaaggaaataatcctaaaggctatctaccgagtcattatgaaaaagtacaaatg
ttattgtctgatcgtttccttggatttttcatggttccgagtcaagggtcttggaattat
aactttatgggtgtgagacatgatccaaatatgaaatatgagctgcaattggcgaatccg
aaagaattctatcacgaaattcacagacctgcccactttttgaatttctctagcttggag
gatggagaaggcgttggagccgatagagaagatgtatttgcataa

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