Bombus bifarius (two-form bumblebee): 117212301
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Entry
117212301 CDS
T07537
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03013
Nucleocytoplasmic transport
bbif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117212301
03015 mRNA surveillance pathway
117212301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117212301
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117212301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117212301
NCBI-ProteinID:
XP_033312879
UniProt:
A0A6P8MW19
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDSAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
SGAGGDADKLINTKISSRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGTGLITTENKRNNIQNDDEQQITHDMKHISVTDGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQHGQ
HNQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTSVATATAPMTGQP
VIPIPPNGQPASYAPPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSSP
VQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRG
KTTQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNTEIEQAEIQETEKIDGSSAIA
NPVVENTEKDIKILDIGTPLNLGDTTANQLDDISANDSSKVTMKEENIISLKAMEPVIEK
AENDSNKVENTTTESTVVEEAVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggagatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gatgaagacagacgtaacccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagatagtgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgacataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacgcgtaattgggaagatgaagatgcatatggaaagcctggaagtaatgtttcaaat
aaaaatagaaagttcaatagaagtggagaagattttcctgctttaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctctacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaagaaggatactaaacattcgtctcacattcagagcagtaatggaaat
agtggagctggtggtgatgcagataaattgattaatacaaagatatcttcaagagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaacacgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaaccggattgattacgactgagaataagagaaataatatacagaatgatgat
gagcagcaaattactcatgacatgaaacacattagcgttactgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acggtacctccaagaatgcagcaacaacaaccacaacagcaacaacaacaacaatcaatt
cagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacagcgatct
actgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacatggacaa
cacaatcaacacaatcaacacaatcaacacaatcaacatggccagcatggtcaacatgga
tattttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaa
ggacattttgagcaaaccacatctgttgctactgcaactgcacctatgactggtcagcct
gtaattcctataccacctaatggtcaacctgccagttatgctccaccaccatttttagta
ccaccacctcagtttatttctccacaaactgctccacctagtataattaattacgttcct
ggtccaaatggaccagcatttcaaccaaatttccaaggttatcaaggttatagttcacca
gtacagccacaacgtcctccacctccacaagaattgtttcaaccgcaaggttgtacttac
tatagcccagcgcagcagcaacagcaacaacaacaatcagctccaatgagacgaccaaaa
gcagctattccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggt
aaaaccacacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaa
gttaaaattaactcaatagaaagtgatcagaagactgtgccagaacagttcgataataca
gaaattgaacaagcagaaattcaagaaacagagaaaatcgacggttcgagtgcaatagcg
aatcctgtggttgagaataccgaaaaagatattaaaattcttgatatcggaacaccactg
aatttgggagatactactgccaatcaattagacgatataagtgctaatgattcatcaaaa
gtcactatgaaggaggaaaatattatttcgcttaaagctatggaaccagtcattgaaaag
gctgaaaatgattcaaacaaagtagaaaatacaacgactgaaagtacagttgttgaagaa
gcagtagcttga
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integrated database retrieval system