KEGG   Bombus bifarius (two-form bumblebee): 117212301
Entry
117212301         CDS       T07537                                 
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
bbif  Bombus bifarius (two-form bumblebee)
Pathway
bbif03013  Nucleocytoplasmic transport
bbif03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bbif00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117212301
   03015 mRNA surveillance pathway
    117212301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbif03019]
    117212301
Messenger RNA biogenesis [BR:bbif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117212301
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 117212301
NCBI-ProteinID: XP_033312879
UniProt: A0A6P8MW19
LinkDB
Position
Unknown
AA seq 803 aa
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDSAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
SGAGGDADKLINTKISSRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGTGLITTENKRNNIQNDDEQQITHDMKHISVTDGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQHGQ
HNQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTSVATATAPMTGQP
VIPIPPNGQPASYAPPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSSP
VQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRG
KTTQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNTEIEQAEIQETEKIDGSSAIA
NPVVENTEKDIKILDIGTPLNLGDTTANQLDDISANDSSKVTMKEENIISLKAMEPVIEK
AENDSNKVENTTTESTVVEEAVA
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggagatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gatgaagacagacgtaacccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagatagtgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgacataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacgcgtaattgggaagatgaagatgcatatggaaagcctggaagtaatgtttcaaat
aaaaatagaaagttcaatagaagtggagaagattttcctgctttaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctctacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaagaaggatactaaacattcgtctcacattcagagcagtaatggaaat
agtggagctggtggtgatgcagataaattgattaatacaaagatatcttcaagagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaacacgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaaccggattgattacgactgagaataagagaaataatatacagaatgatgat
gagcagcaaattactcatgacatgaaacacattagcgttactgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acggtacctccaagaatgcagcaacaacaaccacaacagcaacaacaacaacaatcaatt
cagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacagcgatct
actgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacatggacaa
cacaatcaacacaatcaacacaatcaacacaatcaacatggccagcatggtcaacatgga
tattttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaa
ggacattttgagcaaaccacatctgttgctactgcaactgcacctatgactggtcagcct
gtaattcctataccacctaatggtcaacctgccagttatgctccaccaccatttttagta
ccaccacctcagtttatttctccacaaactgctccacctagtataattaattacgttcct
ggtccaaatggaccagcatttcaaccaaatttccaaggttatcaaggttatagttcacca
gtacagccacaacgtcctccacctccacaagaattgtttcaaccgcaaggttgtacttac
tatagcccagcgcagcagcaacagcaacaacaacaatcagctccaatgagacgaccaaaa
gcagctattccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggt
aaaaccacacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaa
gttaaaattaactcaatagaaagtgatcagaagactgtgccagaacagttcgataataca
gaaattgaacaagcagaaattcaagaaacagagaaaatcgacggttcgagtgcaatagcg
aatcctgtggttgagaataccgaaaaagatattaaaattcttgatatcggaacaccactg
aatttgggagatactactgccaatcaattagacgatataagtgctaatgattcatcaaaa
gtcactatgaaggaggaaaatattatttcgcttaaagctatggaaccagtcattgaaaag
gctgaaaatgattcaaacaaagtagaaaatacaacgactgaaagtacagttgttgaagaa
gcagtagcttga

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