KEGG   Bombus bifarius (two-form bumblebee): 117212542
Entry
117212542         CDS       T07537                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bbif  Bombus bifarius (two-form bumblebee)
Pathway
bbif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bbif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117212542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bbif03041]
    117212542
   04121 Ubiquitin system [BR:bbif04121]
    117212542
Spliceosome [BR:bbif03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    117212542
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    117212542
Ubiquitin system [BR:bbif04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117212542
SSDB
Motif
Pfam: SART-1 HIND COG6_N
Other DBs
NCBI-GeneID: 117212542
NCBI-ProteinID: XP_033313327
UniProt: A0A6P8NFB8
LinkDB
Position
Unknown
AA seq 744 aa
MGSNKRHKTEKSRDAKKKRHRSRSRSYTPEREKSEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQHSPSPSKGGGTQTSLSIEETNKLRAKLGLKPLEVDSG
PKDDPNKIKDDLGEFYHKPAPDVNEKLKTQKLKEKIGTQKQKRLIEANLAKVKSLGECES
DDDTRNWIDKTRRLEEEKKKAEERAKMLDQLDEEFGIGNLVKEEIHAARNTAYTEKNLKG
LKVEHNIEKFEEGKTLILTLKDRQVLEEGEDVLVNVNITDEERYQRNIFNKTKKPGYDAY
DDDNFDEFGFPKKTILEKYDEEIGGTKKDTFTLGINNIKDVKQNKLDYVKQRLANKRLES
LQLTEPKLASEYYNEEELAKFKKPKKKVRKIRKKLKAEDLIPEDNDYLRDLGSRRAKKTE
DVKENDVLDVDDLGAPTEDLSGIKLEEDDKELELQLALKKAQKLKESQLSNIEKVVETIK
QESMGSEESQSGNIVLNATAEFCRTLGDIPTYGLAGNREENGQELMDFEMDGVKEEPPTN
EDEDDGRGAWNTVHLDESTSEPVAMEAAILDAEPSLGHGVGGALKLAMSKGYLQKEDSSR
PSASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSEFKEKDGFKPNVKLEYIDDDGH
VLSAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQKE
TQSPYIVLSGSKQMQTTSISKSKH
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgggctcgaataaacgacacaagaccgagaagagtcgggacgctaagaagaagcgtcac
cgtagccgttcacgaagctacacgcctgagcgcgagaaatcggaaaagcacaggcatcac
aaaaagcatagaagaaaagaacgcaaggattatgatagtgatgttgaaatagttaatgca
cctccacccccaaaaatttctaagtcttcacatccgtcaacgcctccacctcctgaaatt
tctaagcagcacagcccttcgccaagcaaaggcggtggaacacaaacctctctatcgatt
gaagaaactaacaagttaagagcaaagttaggtttaaaaccactagaagttgatagtgga
ccaaaagatgatccgaataagattaaggatgacttgggagagttttatcacaagcctgct
cctgatgttaacgaaaagttaaagacccaaaaattaaaggaaaagattggcactcagaaa
cagaagagactaattgaggctaatttagctaaagtaaaaagtttaggagaatgcgaatct
gatgatgataccagaaattggattgataagaccagacgtttagaggaagagaagaaaaaa
gcagaagaaagggcaaaaatgttagatcagttagatgaagaatttggaattggaaatttg
gttaaagaagaaattcatgctgcacgtaatacagcttatactgaaaaaaatttaaagggc
ctcaaagtggagcacaatattgagaaatttgaagaaggcaaaacacttatcttaacgcta
aaagatcgacaagtgctagaagaaggcgaagacgtgcttgttaacgtaaatataactgat
gaggaacgttatcaacgtaatattttcaataaaacgaagaagcctggttacgatgcatac
gatgatgataacttcgatgaattcggtttcccgaagaaaacaattctggaaaaatatgac
gaagagattggaggaacgaaaaaagatactttcacactgggaattaataacatcaaagac
gtgaaacagaacaaacttgactacgttaaacaacgtttagctaataaacgattagaatca
ttacaattaacagagccaaaactagctagtgagtattataatgaagaagaacttgcgaaa
tttaagaagccaaagaaaaaggttcgaaagattagaaagaaattaaaagcagaagattta
attcctgaagacaatgattatcttcgagatcttggaagtaggagagccaaaaaaaccgag
gacgtaaaagaaaacgatgttttggacgtagatgatttgggagctcccactgaagatctc
agtggaataaaattggaagaagatgacaaagagttggaattacaattagcattgaagaag
gctcaaaaactaaaagaatcccaattatcaaatatcgaaaaagttgttgaaactataaaa
caggagtctatgggttctgaagagagtcaatctggaaatattgttcttaacgccactgca
gaattttgtagaacactaggagacattcctacttatggtcttgctggaaatagagaagaa
aatggacaggagttgatggactttgaaatggacggagtcaaagaggaacctcctacaaac
gaggatgaagatgatggccgtggcgcatggaatacagtgcacctagatgaaagtacatca
gaaccagtagcaatggaagccgcgattttagatgcagaaccttcgctcggacatggcgta
ggtggagcgttaaaacttgctatgagcaaaggttatttgcaaaaagaagatagtagtaga
ccatctgcgtctcgtttcgcacatctacaagctcagaattactcaatagaggacaagact
tatggagacgatgataaatttggtagaagggatcgtttcaatggtccaacgtcagaattc
aaagagaaggatggtttcaaaccaaatgtcaagctggaatacatcgatgacgatggtcat
gttttaagtgcaaaggaagcttttcgatatctctcacataaatttcatgggaaaggtcca
ggaaaaaataaggttgagaaacgaatgaaaaaagcagaacaagaagttttaatgaaacga
atgtcatctacagatacccctctaggaacacttaatttattacaagcaaaacaaaaagaa
actcagtcgccatatatagtactcagtggaagcaaacaaatgcaaacgactagcatatcg
aagtcaaagcattaa

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