Bombus bifarius (two-form bumblebee): 117212877
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Entry
117212877 CDS
T07537
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03013
Nucleocytoplasmic transport
bbif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117212877
09122 Translation
03013 Nucleocytoplasmic transport
117212877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117212877
03041 Spliceosome [BR:
bbif03041
]
117212877
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117212877
Spliceosome [BR:
bbif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117212877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
Vault_2
Motif
Other DBs
NCBI-GeneID:
117212877
NCBI-ProteinID:
XP_033313885
UniProt:
A0A6P8NHA5
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MGKENDSDNTKKRRKSVSGNSGISLKDGDIYKVIISYEEKEAIERLPENDSESFLSTCDN
IRAAMNKIAKLKTTGDVNAKDEIHELQIQTSLAFIELKKLNRMEKFRTKFARDSLISSKS
SVDSRHLHLQNLLYEVMHLKKEVVKCLQFKSKDELIQLVSEEEFYKEAPENISRLEITKH
NPHQLRLARLEWELTQRKQLAALCDELTENKKAVALSIESKQTRLDNLAPQLRTILEASK
PLQESLGLLLDKVRQEHHKATLLASPLYVLYAKASAYRDAYDNSIIVKVEGDEEEAKRAN
NQDGLQESDSDAETVSENVTEETPVHKKRHHRLSREARQEEKRTKLLQRHPLNVKIIIKL
KNEIKLTLQFYYMMSLKVVTVESKLKTDGIMGISTGDMLISESILRELYPRDLGLESPNP
ANYYQLNRHNLGQFSSLGLGIPYKWAQRMAGLHFISLDTREQKFTSCEITQDSVECVLRE
IKRRVIARLELCTEIRQLECGNFPNFTTNNDILPQKLSTILQRFSTISWSNYCNSVNPIF
QEQGLVSSLDIFYEAVLRRGNNELIARIAIKPDYPKIAPVFNISINPIVPASVDILRDIE
REVNVMWIKPPTLSAQLQRLRACFDIYLESETIIPKEKIFFHPVKGRIRARPYKYLELGG
GIFIHR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaaaatgattctgataatacaaaaaaaaggagaaaatcagttagtggaaat
tctggaatatctttgaaagatggagatatatataaggttataattagttatgaagaaaag
gaagctatagaacgtttaccagaaaatgattctgaaagttttctatctacctgtgataat
atacgtgcggctatgaataaaattgcaaaattaaaaaccactggggatgtaaacgctaaa
gatgaaatacatgaacttcagattcagacatcattagcatttattgaactaaaaaaattg
aatagaatggaaaaatttcgtacaaaatttgcaagagattctcttatatcttcaaaaagt
tctgtcgatagcagacatttacatttacaaaacctgttatatgaagtaatgcacttaaag
aaagaagttgttaaatgtcttcaattcaagtctaaagatgaattgatacaacttgtatca
gaagaagaattttacaaggaagcacctgaaaatatttctaggctggaaataacaaaacat
aatcctcatcaactaagactagcacgcctagaatgggaattaacgcaaagaaaacaacta
gccgctttgtgtgatgaattgacagagaataaaaaggcagtagcattgagtatcgaatca
aaacaaactcgacttgataatcttgctccacaacttcgcactatattagaagcaagcaag
ccattacaagaaagccttggtttgttgttggataaagttagacaagaacatcataaagcg
acattacttgcatcaccactgtatgttctttatgcaaaggcatctgcatacagagatgca
tatgataattctataatagtgaaagtagaaggtgatgaagaagaagcaaagcgtgcaaat
aatcaggatggattacaagaatctgattcagatgctgaaactgtttctgaaaatgttaca
gaagaaacacctgtacataaaaaaagacatcataggttatctagagaagctaggcaagaa
gagaaaagaacaaaactgttacaaaggcatcctttaaacgtaaagataattattaaattg
aaaaatgaaataaagctgacattgcaattttattacatgatgtctctgaaagttgtaact
gtggaatcaaaattaaaaactgatggtattatgggcattagtacaggagatatgcttata
tcagaatcgattttacgggaattatatccacgagatttaggattagagagcccaaatcct
gctaattattatcaattgaatcgacataatttaggccaattttcatcacttggattagga
atcccatataaatgggcacaaagaatggctggattacattttatttcactggatacgaga
gagcaaaaatttacgagttgcgaaataacacaagatagtgttgaatgtgtgttgagagaa
atcaaaagacgtgtaatagcaagattagagttatgtacggagattagacaattagaatgc
ggaaacttcccaaattttactactaataacgatattttaccacaaaaacttagtacaatt
ttacaaagattctcaacaatttcatggagtaattattgtaatagcgtaaatcccattttt
caagaacaaggattagtatcttcgttggacatcttttatgaggctgtacttcgtcggggc
aataatgaattaattgcaagaatagctataaaaccagattatccaaaaatagcaccggta
tttaatataagtataaatcctatagtacctgcatctgtagatattttaagagatattgaa
agggaagtaaatgtcatgtggataaaaccgccgacattatctgcacaacttcagcgatta
cgagcatgtttcgacatttatttggaatctgaaactattataccaaaagaaaagatcttc
tttcaccccgtaaaaggtcgtattcgtgctagaccatataaatatttagagctaggcggt
ggaatttttattcatcgttaa
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