Bombus bifarius (two-form bumblebee): 117212943
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Entry
117212943 CDS
T07537
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117212943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117212943
Enzymes [BR:
bbif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
117212943
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117212943
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117212943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117212943
NCBI-ProteinID:
XP_033313993
UniProt:
A0A6P8N003
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MGTCRQDSRFIVRSCQSYTSFSQVTANHPPQRPWIPLTRPNRTRPTCIFTVMCYNVLCDK
YATRQMYGYCPSWALDWEYRKKGILDEIRHYAADIISLQEVETDQFYNFFLPELKHDGYD
GIFSPKSRAKTMAENDRKYVDGCAIFYRTAKFTLIKEHLVEFNQLAMANAEGSDHMLNRV
MPKDNIGLAALLRTKEAAWDNGIPSDPAQVQQPILVCTAHIHWDPEFCDVKLIQTMMLSN
ELRSILDQAGQSFRPGHKPDSSNVQLLLCGDFNSLPDSGVIEFLTSGRVAADHRDFKDLA
YKSCLQKISGCDKPNEFTHSFKLASAYSEDIMPYTNYTFEFKGIIDYIFYSKQSMVPLGL
LGPLSADWFKEHKVVGCPHPHVPSDHFPLLVELEMTPTVGTSNGLISRR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggcacttgcaggcaggactctagatttatcgtgcgttcatgccagtcgtacacttcc
ttctcacaagttactgcaaatcatccacctcaaagaccatggattccattgacgagaccg
aataggacgagaccaacatgtatattcacagtgatgtgttacaatgtattatgcgacaag
tatgcgactcggcaaatgtacggttattgtccgagttgggcgctcgattgggaatatcgg
aaaaaagggatcctggatgagatacgacattatgccgcggacataattagcctgcaggag
gtcgaaacggaccaattctacaatttcttcctgccagaacttaaacacgatggctacgat
ggcatattttctccaaaatctcgagcgaagacgatggcggagaatgatcgtaaatacgta
gatggatgtgctatattttacagaacagcgaaatttacgttaataaaagagcatttagtc
gaatttaaccaattggcaatggcaaatgcagaaggttctgaccacatgctaaatcgtgta
atgccaaaggataatattggattggctgccctgcttaggaccaaggaggctgcttgggat
aatggaattccatctgatccagcacaagttcaacaaccgattttagtttgcacagcccac
attcattgggatccagaattttgcgatgttaaattaatacagacaatgatgctcagtaat
gaattacgttccattttggaccaagctggccagtctttcagacctggtcacaagcctgat
tcttccaatgttcaactgttactttgtggtgacttcaattctctgcctgactctggtgta
attgaatttcttacttcggggcgagtagcggctgatcaccgtgactttaaagacttagct
tataaatcatgcttacagaagatctctggttgcgataaacctaatgaattcactcattct
tttaaacttgcatctgcatatagtgaagatatcatgccctatactaattatacattcgaa
ttcaaaggtataatagattacattttctactcgaaacaaagtatggtaccattaggactt
ttaggtcctctaagtgcagattggtttaaagaacataaagtagttggttgtccacatcca
cacgttccatcggatcattttcctttattagtagagcttgaaatgacaccaacagtagga
acaagcaatggattgatctcacgcaggtag
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