Bombus bifarius (two-form bumblebee): 117213134
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Entry
117213134 CDS
T07537
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03013
Nucleocytoplasmic transport
bbif03015
mRNA surveillance pathway
bbif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117213134
09122 Translation
03013 Nucleocytoplasmic transport
117213134
03015 mRNA surveillance pathway
117213134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117213134
03041 Spliceosome [BR:
bbif03041
]
117213134
03009 Ribosome biogenesis [BR:
bbif03009
]
117213134
03012 Translation factors [BR:
bbif03012
]
117213134
Enzymes [BR:
bbif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117213134
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117213134
mRNA cycle factors
Stress granule specific factors
117213134
Spliceosome [BR:
bbif03041
]
Complex C
Other components
EJC/TREX
117213134
Ribosome biogenesis [BR:
bbif03009
]
Eukaryotic type
90S particles
Helicases
117213134
Translation factors [BR:
bbif03012
]
Eukaryotic type
Initiation factors
eIF-4
117213134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
117213134
NCBI-ProteinID:
XP_033314377
UniProt:
A0A6P8NIM0
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MAEVKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS
IKPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDE
SDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtaaaatcacgtcgcgtcgcacaaacagaagatctatcaaacgttgagttt
gaaacaagcgaagatgtggaggttattccaacgttcgataatatgggacttagagatgag
ttattacgtggaatctacgcttacggtttcgaaaagccgtccgcgattcaacagcggtct
attaaaccgataatgaaaggacgagacgtgattgcacaagcccaatctggtacaggaaaa
acggcaacattttcaattgctatactacaatcattggacacacaagttagagaaacacaa
gtattggtgttgtcacctacaagagaattagcaactcagatacagaaagttattctggct
ttaggagattttatgaatgttcaatgtcatgcttgtataggtggtacaaatcttggagaa
gatattagaaaattagattatggacagcatgttgtatcaggcacacctggcagagtattt
gatatgataaaaaggagagttcttagaactagagccataaaaatgttagttcttgatgag
tctgatgaaatgttaaataagggtttcaaggaacagatttatgatgtatacagatatttg
ccacctgcaacacaagttgtgttggtatctgcaacattgccacatgaaattcttgaaatg
accagtaaatttatgacagatcctattcgtattcttgtaaaacgtgatgaactgacactg
gaggggataaaacagttctttgtcgctgttgaaagagaagaatggaaatttgacacacta
tgtgatttatatgatacattgacaataacacaagcagtaatcttttgtaatactaaacgt
aaagtagattggttaactgaaaagatgagggaggctaattttacagtttgctccatgcat
ggtgatatgccacagaaggaaagagataacataatgaaggaatttcgatctggtcaaagt
cgtgttttgattactactgatgtgtgggcacgaggaatagatgtccaacaggtatctctt
gtgatcaattatgacttgcccaacaatcgtgagttgtatattcatagaataggaagatcg
ggacgttttggaagaaaaggtgtttccatcaatttcgtaaaaactgatgacataaggatt
cttcgagatattgaacaatattattcaacacaaattgacgagatgcctatgaatgtagcg
gacttaatataa
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