Bombus bifarius (two-form bumblebee): 117213563
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Entry
117213563 CDS
T07537
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbif03000
]
117213563
Transcription factors [BR:
bbif03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117213563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117213563
NCBI-ProteinID:
XP_033314897
UniProt:
A0A6P8NKC3
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MPNGVLPDVRRNCSTVDGVVTAIKPISWKEIRSRLRMSSKRKSPPTKLSEGGGGTGTVAG
ANEEEEDTTSSVTGGPGGEVAVGEEGPTTPVDIEECYPHQRGGDCESSGCSSPATTSEPD
LRDSPSPSSNSLQSKRQRIVLSSQETLASYHYPHHHHHHHHHHHHHHTNTSSSSGGVVEP
ASSSECGSPPTPLTVDPYYPSHPHHNNNNNTVTQNNNNNNGGNATTVTSKRSMDDVLKRL
TCKMNSESLSLQDDTSNNRRNSPPPSSTPTGHNAHCGGVASVANSVPPSPPASGRMQNTE
SQVQQDSASAFLFTESFAEKERRLSEMILQLQLLREQLLQQQDQSKSYPAHMTVDSQKQI
EIQRMQTEHLKRQQEHIMQHNIQELQAQMTKSQLSMSGPQSLMFLPFLEQLRGLPVQSPM
PPPPATSTSTTTNKHINSIANMISSHREGPSWATAHLAQMTTQMEKEASPTPISSAVAPT
APPLQDLDAPLNLTKPKSSSSGATASSSSPGSDSHSTGAGSSGQQEQPVAATAPKLFPPG
LPMPRNYLTTLPYAGLPPHLSTLSSPMGKVMAKDEAAGPGGAVTAAAVAAVEKHFAMRGI
YGIPPSAGAMPPSPQTQRPIKHSGSREEAAQEEQDYLSTPHMWREPGYKVPEDITEKAKM
VRQQKREGENKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNSEK
QPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKSLMRQRRQEMRQLWCR
DSGPEMSFLSPVGSDLSTQHHPGTGAAGPSARPSVSPPATMLNGGAAGPSSDHPSFYYTQ
DSLSPSDMMNFSPENSGSIGGYDASPRHHDED
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacggtgtgcttcctgatgttcgccgtaattgttcgacggtggatggggtcgtc
acggccataaagccgatcagctggaaggagattcgaagccgactgaggatgtcctcaaag
aggaagtcaccaccaacgaagctatcggagggcgggggcggtacgggtacagtggcaggc
gccaacgaggaggaagaggatacgacctcgtcggtgaccggtggtcccggtggcgaggta
gccgtcggtgaagaaggtcctaccacccccgtcgatatcgaggagtgttaccctcatcag
aggggaggtgactgcgagtcgtccggctgttcgtcgccggcgactaccagcgagccggat
ctccgagattcgccctcgccgtcgtcgaattccctgcaaagcaaacgacaaaggatcgtt
ttatccagccaggagactctagcctcctaccattatcctcaccaccatcaccatcaccat
catcatcatcaccatcaccacacgaacacatcatcgtcgtcgggtggtgtcgtggaaccg
gccagctcctcggagtgtggctcgccgccaacccccttaaccgtcgacccctattacccg
agccatcctcaccacaacaacaacaacaataccgtcacgcagaataataacaataacaac
ggcggtaacgcaacaactgttacgagtaagagatccatggacgacgttctcaagaggtta
acctgtaaaatgaacagcgagtcgctgtcgttgcaggacgataccagtaataacaggcgg
aacagtccgccaccctcctctacgccgaccggacacaacgcgcactgcggaggcgtcgcc
agcgtggcgaacagcgtgccaccctcacccccggcctctggcaggatgcagaacacggaa
agtcaggtccagcaggatagcgcgtcagcgttcctcttcacggaaagcttcgcagagaag
gagcgcaggctctccgagatgatcctacagctgcagctgctcagggaacaattgctgcaa
cagcaagatcagtcgaagtcgtatcctgcgcacatgaccgtcgactcgcagaagcaaatc
gagatacaacggatgcaaacggagcacttgaagcggcagcaagagcacatcatgcagcac
aacatccaggagctacaggctcagatgacaaagagccagctgagcatgtcggggccgcaa
tccttgatgttcctaccgtttctcgaacagctcagagggttgccggtgcaatcgcctatg
ccgccaccgccggctacgtcgacatcaaccaccaccaacaaacatatcaattcgatcgct
aacatgatcagcagtcaccgggaaggaccgagctgggcgacggcgcatctcgcgcaaatg
accacgcagatggagaaggaagcgtcgccgacgccgatctcgtccgccgtagcaccaacc
gcacctcctctgcaggatctcgacgcacctctcaacctcaccaagccgaaatcctcgtcg
tcgggagccacggcatcttcctcgtcacctggtagcgactcgcactcgacaggggccgga
agtagcggtcaacaggagcaaccagtcgcggcgaccgcgccgaaactctttccgcctggt
ctaccgatgccacggaattatctcacaacccttccttacgcaggtctgccacctcatctg
agcaccctctcctcgccaatgggcaaggtaatggccaaagacgaagcggctggaccagga
ggtgccgtgactgccgccgcggttgccgccgtcgagaagcatttcgctatgcgtggcatt
tacgggataccaccgagtgctggtgcaatgcctccgtcgccgcagactcaacgaccgatc
aagcactccggttcccgggaggaggctgcgcaggaggaacaggattatctgtccacgccc
cacatgtggcgggagccgggttacaaggtaccggaagacataacggaaaaagctaaaatg
gtgagacagcagaagagggagggtgagaacaagccacatatcaagcggcctatgaacgcg
ttcatggtgtgggccaaggacgagcgtaggaaaattttgaaagcctgcccggacatgcat
aattccaacatatcgaaaatactcggtgctcgatggaaagcgatgtcgaactctgagaaa
caaccatactacgaggaacaatcacggctgtcgaagttgcacatggagaaacaccccgac
tacaggtacaggccgcgaccaaagcgcacctgcatcgttgatgggaagaagatgcgcata
tccgagtataagtcgctgatgcggcaacgacggcaggaaatgaggcagctctggtgtcgt
gacagcgggccagagatgagcttcctgtctccggtgggctcggacctcagcacgcaacat
catccgggaacgggggcggccggaccatcggcaaggcctagcgtgtcgccgccggctacc
atgttgaacggcggtgcggctggtcccagttccgatcatccgtcgttctactatacgcaa
gacagtttatcgccgtcggatatgatgaacttctcgccggagaactcgggctcgatcggt
ggctacgacgccagtccgcgacatcacgacgaagattga
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