Bombus bifarius (two-form bumblebee): 117213981
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Entry
117213981 CDS
T07537
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117213981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117213981
03036 Chromosome and associated proteins [BR:
bbif03036
]
117213981
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117213981
Chromosome and associated proteins [BR:
bbif03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117213981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
117213981
NCBI-ProteinID:
XP_033315625
UniProt:
A0A6P8MPC3
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MFGQTGNTSFSSFNTPTQSSPFGQSAFGKPITTTSFGSGATPVFGSGNTSLFSSKPAGST
TGGLFGNTTTPPAFTQPSFGGFGTTNTNTNLFGSQQNASTNLFGTNTATSAFGQSNKPAG
FGFGTTSGTNLFGQPQQSTQQTTPFGQSSTTGNTNLFGATPGFGNANTATTSITGTVVKF
APMITTDSMSKNGISHTISVRHCCIATMKEYESKSYEELRFEDYSVGRKGPSTGIFGAPA
QPSPFGNAGAGTSTATTGFGGMSAGFGATTQSGSSGLFGKPISTFGTPSTTTTNNFAFNS
TPSTNLFGSNTQNKPFGNLSTAAAPTPLFATSNTNQTAGTGFGGINTGQNTAFGSAFGST
QPNQSIGLFNQNKSAFNAPSTSSSTGFSTFGQTPMSNTGTPLFCSKSTGTIGFGVNSTFG
STAPSTFGTAPGFNAGQNSGTSLFNTPFKPAGQTSGFSFGSTSTPSSGLGTNTGLMLGSG
STLFGQQKSGGLFGNSGNNAPFNTSGTFGSSTFGNNTNVGTGIGTGLLGAGNTTNQVKSS
GTVPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPANAPSKLMNGQQYKVTADNKS
PKIKTKVVTPAQLSKKSMFEGLEEEDPLSEAFQPRPNAKRLVLRPKSISNSIVPSPTESS
QTVGKNLQSPGKGEEKSSVTNTYIENTTIETVDKENHSQDNNRQLVNDRRSSLSWLKTSL
PRNGKNLDEESYEAQRSLFSSPNALSEEMINNTVTELRPYANANSSNQKCSEINTSVDTS
LKNSSLVDKTCTDIVTQNSDSSQELDESSFSTLQTSSWKPNAAKVTLKRAGYYTIPPLDK
LDEYVRGETCIVPNFTVGREDYGNVYFPESFDIYGLNLDEIVHFRHKEVIIYPDDEKKPP
IGEGLNRKAQVTLDQVWPHDKSLHKPITDPQRLAAMDYEEKLRRVSAKHDTRFLEYRPET
GSWVFKVDHFSKYGLSDSDEEDNNVPTANDTKRLKLCATQQKCATKQEQSKVVSNKDTSK
TNGLKTANTDYSDLDARGLLLEAIVSRRSFRTDQNREKQLPISPTGENARILGTDSHKLQ
LMKASFFDGSDEEINEAYDQESNRALFLSDRRSSLRCFTNTPQKLDEDQDYEPIYSPMLR
SNLTIHRTPTIAYEESTLSKTDSKVKRSMDIVAKTSTMYEKGLPDPSITPVTTILRCISE
VIPLSKSIIHKLESRSVADIGIQMGRRFKPSWGRGLTLLTLSTKKQADDVLLNNSFEQIG
SYVCGRSPEDTTSVGIVQRIQILGGSGTGEERIKTFKESIEGHLKIQLSHRVMNPDEDCL
IFDVDTDINKASMALHAHCSLAEEFAEQFATDSFASYVANVWKLCVALWGNLPDINVATE
NSEDHSVVIARREAIGQWLRNVIRKTLVLEDTDINYETKILLLLSAFELEEACKIAREMG
DHCLALLMAQLCSGMPIKVLTQQQIALWQNAGVDENLSLDRLKLFALVAGEPPSKHCPIN
VCEGFDWKRALAVHLWYFSSPTASIRDILDIYEASFDTTKTNDVYTSIPKPEYKGNNFEL
EINNGKPIYDLCFHLLKLFCTGNHTLGELLNPATHTADPMDYRLSWLMQQVLLALGYSHL
SEHVAILTHVNFATQLEAYDLWHWAIFVMLHLKDAAKRKTAVMNLLQRHVEIDDASDCPD
FIERETFLREELGIPSIWIHHAKAVKSYVAKRYGKAAFYFIQAEQWNKAHEIIIEYLAAD
VIINENYDYLRSLLRPLTPLECSSTISGWTYQGQLLWEYMEITMNVESLLRNADPRGISS
KLESLKQRLSNLPSKINQFPCLTAKHRLCQAEIAKRTIHLARNLLQLNENKSTSIYQLVS
QLPLPEDYAQQELRFVINMCVNEIIY
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaaactggaaatacctcttttagtagttttaatacaccgacgcaatccagt
ccatttgggcaatctgcgtttggtaaaccaatcactacaacaagttttggttctggtgct
acaccagtctttggcagtggtaatacttctctctttagttcaaagcctgcaggttctacc
actggtggtttgttcggcaatactacaactccacctgcatttactcaaccatcttttgga
gggtttggtacaacaaatacaaataccaatttatttggctctcagcagaatgcaagtaca
aatctttttggtacaaatactgcaacgtcagcatttggtcagtcaaataaaccagctgga
tttggttttggtactacatctggtacaaatttatttggacaaccccaacaatcaactcag
caaaccacgccttttgggcaaagcagtaccactggaaatacaaatttatttggtgcaaca
cctggttttggcaatgcaaacacggcaaccacaagtataactggtactgtcgttaaattt
gctcctatgattactactgattccatgtccaagaatggtatatctcatactatatcggtg
agacattgttgcattgcgacaatgaaagaatatgaatcaaaatcgtacgaagagttacgt
ttcgaagattattctgtgggacgaaaaggacccagtacaggaatctttggtgcaccagca
caaccttcaccttttggtaatgcaggggcaggtactagtactgcaacaacgggctttggt
ggaatgagcgctggctttggagcgaccacacagtctggctcaagtggtctatttggaaag
cctataagtacttttggtacaccctcgacaacaacaacaaataattttgcttttaattct
actccaagcactaatctgtttggttctaatacccagaataaaccatttggtaatttatct
acagcagcagctccaaccccactttttgcaaccagcaatactaaccaaactgctggtaca
ggtttcggtggcattaatacgggtcaaaacactgctttcggctccgcatttggttcaacg
caaccgaatcagagtattggtctatttaaccaaaacaaatcagcttttaacgcaccttcc
acatcgtctagcactggattttccacttttggtcagacaccaatgagcaatacgggtaca
cctttattctgttctaaatcaactggaacgataggtttcggagtaaattcgactttcggt
tcgactgcaccatcgacttttggaactgcaccaggtttcaatgcaggtcaaaattccggt
acttcgttgtttaatacaccttttaagcctgcaggacaaacatctggattttcttttggt
tcaacttctacaccatcgtccggactcggtacaaatacgggtttaatgttgggtagtggc
tctactttatttggtcagcaaaaatcaggcggtttgttcgggaacagtggcaataatgca
ccgtttaatacatcggggacgtttggatcttcaactttcggaaataatacaaatgtagga
acgggtattgggactggattactcggagctggaaatactacgaaccaagtcaaaagttcc
ggaactgtcccggtgcatcaacaaattttagccttggtgtcagcacctttcggcgattca
ccgttattaaaaaatcttttaccagcttccggtaaaacagaagagttattaaaaccggca
aacgcgccatccaaattaatgaatggtcaacagtataaggttactgctgataataaatct
ccaaaaatcaagaccaaagttgttactcctgcacaattatctaagaagtcaatgttcgaa
ggtcttgaagaggaagatccactctcggaagcatttcagcctcgtccaaatgcaaagcgt
ttggtactacgtccgaaatccatatcgaactcaatagttccatcgcctacagaaagttca
caaactgtagggaaaaacttacaatctcccggaaaaggagaagagaaatcatctgtaaca
aatacatatattgaaaatacaactattgaaactgtagataaagaaaatcatagtcaagat
aataatcgacaattagtaaacgatcgaagatcatctttgtcttggttgaaaacgagcctt
ccacgaaatggaaaaaatttagacgaagaatcatacgaggctcaacggtcgctattttct
agtccgaacgcattgtccgaagagatgataaacaatactgttactgaattgcgaccttat
gctaacgccaattcatcaaatcaaaagtgctctgaaattaacacatctgtggatacgtct
ttaaagaattcatctctcgttgataaaacatgtacggacattgtgactcaaaactctgat
tcgagtcaagaattggacgaaagttccttttcgacgttacaaacttcgagctggaaacca
aatgcagctaaagtgacgctgaaacgtgctggttactatacaattccgccacttgataaa
ttagacgagtatgttcgcggtgaaacgtgtattgtaccaaacttcactgttgggcgtgaa
gattatggaaatgtgtatttccctgaatcgtttgatatatatggcctgaatttagacgaa
atcgtacattttcgacacaaggaagtcataatttatccagacgatgagaagaaaccacct
atcggagaaggattaaatcgtaaagcacaagttactttagaccaagtatggccacacgat
aaatctctacataagcctattaccgatccccaacgtttagctgcgatggattacgaggaa
aaattacggagagtgtcagcgaaacatgatactagattcttagagtatcgacctgaaact
ggttcatgggtttttaaggtagatcatttttctaaatatggcctaagcgattcagatgaa
gaagataataatgtccctacagcgaatgacacgaaaagattaaaattgtgtgcaactcaa
caaaaatgtgcaaccaagcaggagcagtcaaaagtagtttcaaataaagatacttccaag
accaatggtttgaaaacagcgaatacagactattcagatttagatgcacgtggacttctc
ttggaagcaattgtctcacgccggtcgtttagaacagatcagaatcgtgaaaaacaacta
ccaataagtccaactggtgagaatgctcgcattttgggtacagacagtcataaactgcaa
ttaatgaaggccagcttctttgatggtagcgacgaagagattaacgaggcttatgatcaa
gaatcgaatcgcgcgttatttctttccgatcgtagaagttctttgcgatgtttcaccaat
acgccacaaaagttagatgaagatcaagactacgaaccaatttacagtccgatgttacga
tctaatttgacaattcatcggacgccaactattgcttatgaagaatcgaccctttcgaag
acagattccaaagtgaaacgctccatggacatcgttgctaagacatcaacgatgtatgaa
aaaggtttaccggatccttcgataactccagtgactacaattcttcgatgtatttctgaa
gtgattccgttatcaaaatctattatacataaactggagtctcgttctgttgctgatatt
ggcatacaaatgggaagaaggtttaaaccaagctggggacgtggtttaacattacttaca
ctgagtacgaaaaaacaggctgacgatgtactattaaataattcttttgaacaaattgga
tcttacgtatgtggtcgttctccagaagatacaacatccgttgggatagtccaacgtata
caaattttgggtggtagtgggaccggcgaagaacgcattaagacattcaaagaaagtata
gaaggtcatctaaaaattcagctgtcacatcgtgtaatgaatccagatgaagactgtcta
atttttgacgtagatacagatattaataaggcgagcatggctttacacgcacattgtagt
ttagccgaagaatttgcagaacagtttgccacagattcctttgcttcctatgttgctaac
gtttggaaactctgtgtagctctttggggaaatttacctgatataaacgttgccacagaa
aattcagaagaccatagcgtcgtaattgcgcggcgagaggcaatcgggcaatggttaaga
aacgttatacgaaaaactctcgtgttggaggatacggatattaattatgaaacaaagata
ttgcttttactatctgctttcgaattagaagaggcgtgtaaaattgcaagagaaatgggt
gatcattgtttggctttattgatggcgcagctgtgcagtggaatgccaataaaggtatta
acacagcagcaaattgcattatggcaaaatgccggtgttgatgaaaacctctcgttagat
cggctaaagctttttgcacttgtggcgggtgaaccacctagtaaacattgcccaatcaat
gtctgtgaaggctttgattggaagagagcgttagctgttcatttgtggtatttctcatct
ccgactgcctctataagagacatattagacatttacgaggcctccttcgatacaaccaag
acaaatgacgtttatacgtcgataccgaaacctgaatacaaaggaaataatttcgaactt
gaaataaataatgggaaaccaatatatgatctctgttttcatcttttaaagttattttgc
actggcaatcatacgttgggtgaattattgaatccagcaacacatactgctgatccaatg
gattacagactcagttggctgatgcagcaagtacttttagctttgggttattcacatctt
tcggaacatgttgccatcttgacacatgttaattttgcgacacaattagaagcatatgat
ctctggcattgggccatattcgtaatgttacatttaaaagatgccgcaaaaaggaagact
gcggtaatgaatttattgcaacggcatgtcgaaatagacgatgctagtgattgtcctgat
tttatcgagagagaaacgtttttacgagaagaattgggtataccttcgatttggattcac
catgcgaaagccgtgaaaagttacgtagctaaaagatacgggaaagcagctttctatttt
atacaagcagaacagtggaataaggcgcatgaaattattattgaatatttagcagcagat
gttataataaacgaaaattacgattacctgcgcagcttattgcgtccactgactccttta
gaatgcagtagcactataagtggttggacatatcaaggacaattactctgggaatatatg
gaaataactatgaatgttgaatctttgctacgtaatgccgatccacgtggaataagttct
aaattggaatcactaaaacaacgattgtcaaatcttccttccaaaatcaatcaatttcca
tgtttaactgcgaaacacaggctttgtcaagcggaaattgcaaagagaacgatacactta
gctaggaatttgttacaactgaacgagaataaatctacgtcgatatatcaactggtatct
caattaccattgccggaagactatgcacaacaagagcttcgttttgtcattaatatgtgc
gtgaacgaaattatatattaa
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