Bombus bifarius (two-form bumblebee): 117215382
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Entry
117215382 CDS
T07537
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbif03041
]
117215382
03009 Ribosome biogenesis [BR:
bbif03009
]
117215382
Enzymes [BR:
bbif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117215382
Spliceosome [BR:
bbif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117215382
Ribosome biogenesis [BR:
bbif03009
]
Eukaryotic type
90S particles
Helicases
117215382
Pre-60S particles
117215382
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
117215382
NCBI-ProteinID:
XP_033317648
UniProt:
A0A6P8N9D2
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MSVPNKVLMRKIKKKERKKLEVLKEREKQVQGYKCEAPIENLEDDVQENEIDVINESKRR
HSQESVPVKKKRKKNEDDQISQENNTNSIDENLPGSAMGLTIANDTNFKVLAESVCENTL
KAIEDMGFTNMTEIQAKAIPPLLEGRDLVGSAKTGSGKTLAFLIPAVELIYKLKFMPRNG
TGCIIISPTRELSMQTFGVLKELMKYHYHTYGLLMGGANRQTEAQKLAKGINIIVATPGR
LLDHLQNTADFLYKNLQCLVIDEADRILDIGFEEELKQIINILPKKRLTMLFSATQTKRT
EMLTTLALKKEPVYVGVDDDKEKATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVF
FSSCMSVKYHHELLNYIDLPVLSIHGKQKQTKRTTTFFQFCNASSGILLCTDVAARGLDI
PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQARVPVNEF
DFSWNKIADIQLQLEKLVSKNYFLNMSAKEAFKAYVRAYDSHHLKQIFDIETLDLSKVAK
SFGFVVPPAVDLKVGISKNSRPRKKLGGGYGYSKFKSRSNF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtacctaataaagttttaatgcgaaaaattaagaaaaaagaaaggaagaaactt
gaagtattgaaagaacgggagaagcaagtacaaggttataaatgtgaagccccaattgaa
aatttggaagatgatgttcaagaaaatgagatagatgttataaatgaatcaaaacgacgt
cactcacaagaaagtgtgccagtaaaaaagaaacgaaaaaaaaacgaagatgatcaaata
tcacaagaaaacaatactaatagtatagatgaaaatttacctggatctgcaatgggtcta
acgatagcaaatgatacaaattttaaggtattagcagaatctgtttgtgaaaatacttta
aaagcaatagaagacatgggttttacaaacatgacagaaatacaagcaaaagctattcct
cctttactagaaggaagagatctagtgggttctgcaaaaacaggatctgggaaaacttta
gcatttttaatacctgctgttgaattaatttataaattgaaatttatgcctcgcaatggc
acaggttgtattattatatctccaacacgagagttgtctatgcaaacatttggagtttta
aaagaactaatgaaatatcattaccatacatatggtttactaatggggggtgctaataga
cagactgaagctcaaaaacttgcaaaaggaattaatattatcgtagctacccctggtaga
ttattggatcatctacaaaatacagcagactttttgtataaaaatcttcaatgtctggtt
attgatgaagctgatcgtatcttagatattggttttgaagaagaactgaaacaaattatt
aacattttaccaaaaaagagactaacaatgttgttcagtgcaacacaaaccaagcgaacg
gaaatgttaacgactttagctttaaaaaaagaaccagtttatgttggtgttgatgatgat
aaggaaaaggcaacagtagaaggtttagaacagggttatgttgtgtgccccagtgaaaag
agatttttacttttatttacttttttaaaaaagaacaggaagaaaaaggttatggttttc
ttcagttcatgcatgtcagtcaaatatcaccatgaactactaaattacattgatttgcca
gtattaagcatacatgggaaacagaaacaaacgaagagaacaacaacatttttccaattc
tgtaacgcgtcttctggtatactcctttgtactgatgtggctgctcgtggtcttgatata
ccagctgttgattggattgtacaatatgatcctccagatgatcctaaggaatatattcat
cgtgttggtagaacagctcgaggagaaggtagtagcggtcatgcgttactaattttgagg
ccagaggaacttggtttcctccgttatcttaaacaggctagagtacctgtaaacgaattt
gatttttcatggaataaaattgctgatatacaattacagcttgaaaaattggtttcgaag
aattattttttaaatatgtcagcaaaagaagccttcaaagcatatgtgagggcatatgat
tctcatcatttgaaacaaatttttgacattgagaccctggacttatcgaaggtcgcaaaa
tcttttgggttcgtggttccaccagctgtggatttgaaagtgggaataagtaaaaattcc
cgaccacgaaaaaaattaggtggaggttatggatactctaaatttaaatcacggtctaac
ttttaa
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