Bombus bifarius (two-form bumblebee): 117215838
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Entry
117215838 CDS
T07537
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
bbif
Bombus bifarius (two-form bumblebee)
Pathway
bbif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117215838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbif03019
]
117215838
Messenger RNA biogenesis [BR:
bbif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117215838
mRNA degradation factors
5'-3' decay
Decapping complex
117215838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ELFV_dehydrog_N
Motif
Other DBs
NCBI-GeneID:
117215838
NCBI-ProteinID:
XP_033318226
UniProt:
A0A6P8MWC2
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MKMIKTGEDNLNLQYQQTVEFTGQENQHSVELYSSNVVVIPSPGGHNHGSSKVKLKNIVD
FTWEHNFYPGQLLAVHMSGKYLAYGIKVGNGGGMVRVVYKELEQRALLRGMRAAIQDLAF
AHVSNAILACVDYLGNLFIHTIESTPPELLCSLLLQVDAEDISPTSHRVIWCPYIPEDVP
SDGDKVSKLLVLTRGSKVELWSVNTVSARFRSIEAIDPAVKENGGMLEIDQHSDTIIEAT
FSPDGTALATASFDGEVKFFQVYLHSNSHGNQVQPRCLHQWRPHGGRPISCLFFLDDHKT
YHPEVQFWRFAITGCDNNTELKVWSCEVWSCLQTIKFAPTPSTGKLPVLKAGLDLSAGYL
LLSDIYNKVLYILSLTKDNDEITSVNTISEFLLPYPILSFGIVDAGLCKIRPTAESLEDL
CPCEEDTEEQLVIRMYLVQPKSLQECHITFKPASQVSGNCLMDTLTHKSLGYSEDTRDMG
NVNHNGISVENCEENRSLSATLEATTNHNAGLNLMTPDAFSSPAKKENNELDSRPSSPEL
GKVLSASPSLAQAVQALNATDPPLATNELEEQAPASSGSSPSREVREILSLTKADEEPEP
ENKPKDTNTADEDWPNIPMVLLKDVSRHAMQEADGFTNDEEKRKRLKDESKPTTHTTGNT
ENTWQTTNELNTLELINKVESILEIIQDQRQELRELSTEVTRLRQETPISTRVESALARA
SQQLNATLEQTLYSQMARQHDFLKTLETAMKDKIETTLPRIIEDTVEPLKHQLRLDSARM
DELLKKNLTELINSNHIKDTLAMAAVNAAKPALDAAFKETFTNVLLPGMEKACQTMFKQV
QDAFVRGTREYLQNVDAIADKQYQQRNEQQSEALSALVREELQTELNRGLIILQEGTIRT
IRDSIRDNLNQQLTEITNVRSRATTPAIPVSTVADAQARVISLLQRGQLNAAFQQALSAS
DLGLVVLVCEKTEPSRVFSSVGPQGQTSRCILQQPVILSLVQQLSADLGHRTELKHRWLE
EAILNLDPNDPVTREHMGTVLMTLQSQLAAFVAANPSHSSIRRMKMLAMAARALFNQQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatcaaaacgggagaggataacctaaatcttcaatatcagcaaacagtagaa
ttcactggacaagaaaatcaacattcagttgaattatatagtagcaatgttgttgttatt
ccttcaccaggaggtcataatcacggtagttcaaaggtgaagttaaaaaatattgttgat
tttacatgggaacataacttttacccaggccaattattagctgttcatatgtctgggaaa
tatttagcttatggcataaaagttggtaatggaggaggtatggttagagttgtatacaaa
gaattggaacaaagagctctgttaagaggaatgcgtgcagcaatacaagatctggctttt
gcacatgtttctaatgcaattttggcatgtgttgattatttgggaaacctttttatacat
accattgaatcaacaccaccagaattgttatgtagtttattgctacaagtagatgcagaa
gatatatctcctactagtcatcgtgtgatatggtgtccatatattcctgaagatgtacca
tcagatggagataaagtttcaaagcttttagttctaactcgtggttccaaagtagagttg
tggtcagttaatactgtttcggcaagattcagatcaatagaggcaattgatccagctgtg
aaggaaaatggaggcatgttggaaattgatcaacattctgacacaatcatagaagcaaca
ttcagtccagatggcacagccttagctacagctagttttgacggagaagtcaaattcttt
caagtttacttacatagtaattctcatggtaatcaagtacaacctcgttgtttacatcaa
tggagaccacatggtggacgaccgatttcctgcttgttcttcctagatgaccataaaaca
taccatccagaagttcagttttggaggtttgccataactggatgtgacaataatacagaa
ttaaaagtttggtcttgtgaggtatggtcctgtttacaaaccattaaatttgcacctaca
ccttctaccggtaaattaccagtgttaaaagccggcttagatcttagtgcaggatacctt
ttattatcagatatatacaataaagttctgtacatattaagtcttacaaaagataatgat
gaaataacatcagtaaatacaatatcagagttccttctcccgtatccaatactgagtttc
ggaattgttgatgctggtttatgtaaaattcgtcctactgcagaatcgctggaagactta
tgtccttgtgaagaagatactgaagagcaacttgttataaggatgtatctagttcaacca
aagtcattacaagaatgtcatatcacttttaagcctgcctcacaagtgagtggtaactgc
cttatggacacactaactcataaatcactgggctactctgaagacacacgagatatggga
aatgttaatcataatggaatttcagtggaaaattgcgaagaaaatcgttccttatctgcc
acacttgaggcaacaacaaatcacaatgctggcttaaatttaatgacgccagatgcattc
agctcacctgccaaaaaagaaaataatgaattagattctcgccctagtagcccagaatta
ggtaaagtgttatctgctagtccctcacttgcacaagcagttcaggctctaaatgcaaca
gacccaccattagccacaaatgagttagaagaacaagcacctgctagtagtggtagtagc
ccgtcgagagaagtaagagaaattttatctcttacaaaagcagatgaagaaccagaacca
gaaaataagccaaaagataccaatactgctgatgaagattggcctaatatcccgatggta
ttattaaaagatgtaagcagacatgccatgcaggaagccgatggattcacaaatgatgaa
gaaaaaagaaaaagattaaaagacgaatcgaaaccaacaacgcatactacaggaaatact
gaaaatacatggcaaacaacaaacgaattgaatactctcgaactaataaataaagtagag
tcaattttggaaataattcaagatcaacgacaggaattaagagagttaagtactgaagtg
actagattaaggcaagagacaccaatttcgacgcgagtagaatctgctttagcacgagct
tcacagcaactaaatgcaaccttagaacaaacattatatagccaaatggctcggcaacac
gattttcttaagacacttgaaacagcaatgaaagacaaaattgaaactaccttaccacgt
attattgaagacacagtagagccattaaagcatcaacttagattagattctgctcgaatg
gatgaactcttaaaaaagaatttgacagaactcattaatagtaatcatataaaagacaca
cttgctatggcagcagtgaatgcagcaaaaccagcattagacgcagcatttaaagaaacc
tttacaaatgttcttttacctggcatggaaaaagcatgtcaaacaatgtttaaacaagta
caggatgcttttgttaggggtactcgtgaataccttcaaaatgtggatgcaattgcagat
aaacaatatcagcaaagaaatgaacaacaaagtgaagcgctatccgcattagttcgcgaa
gagttacaaacagaattaaatagaggtttaattattctccaagaaggaacaatacgtaca
attcgtgattctattagagataatttaaaccaacaacttactgagatcacaaatgtgcgt
tctcgagctactacacctgctataccagtatcaacggttgctgatgctcaagcgcgagtt
atatctctcctccaacgaggacagttaaatgctgccttccaacaagctctaagtgctagt
gatttaggcttggtagtactagtttgtgaaaaaacagaaccttctagagtattttcttct
gtaggacctcaaggtcaaacctcaagatgtattttacaacaacctgtaattctttcactt
gtacagcagttatccgcagatttaggacaccgtacagaactgaagcataggtggcttgaa
gaggcgatattaaatttagatcctaatgatccagtaacacgagaacatatgggtactgtg
ttaatgactttgcaatctcagttagctgcttttgtagcagctaatccaagtcatagttct
atacggcgtatgaaaatgttagctatggctgcccgtgcactttttaatcaacaaccttga
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