Bombus bifarius (two-form bumblebee): 117216001
Help
Entry
117216001 CDS
T07537
Name
(RefSeq) protein slit isoform X1
KO
K06839
slit 2
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbif00536
]
117216001
Glycosaminoglycan binding proteins [BR:
bbif00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117216001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRR_1
hEGF
EGF_TEN
LRR_14
LRRCT
EGF_3
LRR_LRWD1
LRR_EndoS
EGF_Teneurin
LRR_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117216001
NCBI-ProteinID:
XP_033318444
UniProt:
A0A6P8NDU3
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MARAMTPAWSLRLLGVSCGSVVCAWGLLLILSVLGGGASHGTALGNFGLGSLSGTMEEMN
SGRCPWLCTCTGQEVDCSQQGLTQIPGDLASLLLAEKLDLQGNNISVIFKTDFEDMATLH
VLCLSNNQIHTIERGAFQDLVGVEKLRLNNNQIRHIPDLLFSNMMNLKRLDLSHNQIATI
GPKTLRGISSLKYLYLDNNVLTCIDEASIRELKDLEVLMLNNNKLTTLGKEMLSGFSHLR
TLKLVDNPLSCDCHLAWLSRHLKTYPRLGQHTRCSSPIHLKDRNIADLQEHEFKCSGLVE
RTGSECSAEPQCPHPCRCADGIVDCRENSLTKVPTHLPEDTTELRLEQNRITEIPPKAFS
PYRKLRRIDLSNNQIKKVAADAFHGLKSLESLVLYGNKITELPGGLFQGLTNLQLLLLNA
NEISCIRTDLFRDLTSLTLLSLYDNNIRSLANGTFANLRSIETLHLARNPFICDCNLRWL
NAYLHAHPIETSGAKCESPKRAQKRKIDSMRDDKFKCDEELLTKRAGECILPGECPEPCI
CNGATIDCSNKKLTSIPKELPIYTSTLLLANNELDKIKADGVFEKLPELQHLDLRKNKIS
RIEASAFSGAHKLTDLLLSENRLREVHNKMFTGLTNLKTLNLHGNAITCVMHGSFDGLTH
IRTINMQSNPLSCNCHLAWFAGWLRKRDMSGVVGHCHDPPRLKSAIIKDIPHHEFKCNND
SVGCLGDDYCPPQCNCAGSVVRCSRSQLTEIPRGIPPETTELYLDVNDIKTIQPERLNHL
RILTRLDLSNNQIGMLSNDTFRNLTKLSHLIISYNKLQCVQRNALAGLKSLRIMSLHGND
ISVIPEGAFEDLQSITHLALGSNPLYCDCSMRWLAEWVKKDYVEAGIARCMEPPAMRDKL
LLTTPATAFQCKTNQQPAEVLAKCDLCYTSPCQNGGFCEALPDRKFRCKCAPGYHGDRCE
HKIDACYGNPCRNAGTCKVLEEGRFSCDCAPGYKGLRCENNVDDCENNKCANNATCVDLV
QAYRCDCTPGFMGEYCEEKIPFCTKGHDPCENGGRCVDHGTHYSCECPIGFTGLNCSTNL
DDCVDHMCQNGATCIDGINNYECKCAAEYTGRYCEAAPSTAMLYPQTSPCAHHDCQHGAC
FQPAPASAADYLCQCHPGYTGKRCEYLTSLSFVDNSSLVELEPLRMRPEANVTIVFTTTQ
ENGVLLYDGQNGDHIAVELFNGRVRVSYDVGNYPTSTMYSYEMIADGKPHVAELLAIKKN
FTMRVDRGPARSIINEGPKEYLKLITPMYVGGVAPEVANIAFTEFHLRNITSFQGCITEM
WINHKLVDFSNAAKMHRVTPGCMSNEEEADEARDVMEAEGIMGGSSNEESMPQENMAHEH
SDIVMTGPGAIISDPCATHECRKGSQCVPSPMGNGYTCRCQTGWQGRYCEKAPTCRKEHT
REYYSENGCRSRRPVKLAKCWGSCGNSCCLPRKTKRRKVRLICVDGMRYTKDVDLVRKCT
CTRKCY
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtgccatgacgccggcttggtcgctgcgtttgctcggcgtcagctgcggttcc
gtggtctgcgcctggggacttctgctgatattgtccgtgctgggcggtggcgcctctcat
ggtaccgccctcggtaacttcggtctcggaagtttgtcgggtacgatggaggagatgaac
agtggtagatgcccgtggttgtgcacgtgtaccggtcaagaggtcgactgctctcaacag
ggactcacgcagattcctggagacctggccagccttcttctcgccgaaaaactggacctc
caagggaacaatatctcggtgatattcaagacggactttgaggacatggccacgcttcac
gttctttgcctatcgaataatcaaattcacaccatagaaagaggtgccttccaggattta
gtcggtgtcgagaagctacgtctgaacaataatcaaatacgtcacatccccgatcttctc
tttagcaacatgatgaatttaaagcgcctagaccttagccacaatcagattgctacgatt
ggaccaaagacactcagagggatttcatccctaaagtatttgtatctcgacaacaatgtg
ttaacctgcattgacgaggcatcgatacgagagctaaaggatttggaagtattaatgttg
aacaacaataagttaacgacattaggcaaagaaatgctcagtggcttttcacatttgcga
acattaaagctggtggataacccattatcttgcgattgtcacttagcttggctctctcga
catttaaaaacctatccgagacttggacaacacacgcgatgcagctctccaattcatttg
aaggatcgaaatatcgccgatttacaggagcacgaattcaagtgttccgggctggttgaa
cgtacaggatcagagtgcagcgcggaaccgcagtgcccgcatccttgcagatgcgctgat
ggtatcgtcgactgcagagagaattctttaacgaaagtacccacccatctgccggaggat
accacagaactacgtttggagcagaaccgtatcacggaaatcccgccgaaggctttctcc
ccgtacagaaaactgcgcagaatcgacctcagcaacaatcaaattaaaaaggtggcggcc
gacgcgttccacggcttgaaatcgttggagtcacttgtgctgtatggaaataagatcacc
gaattacctggtgggttgttccaaggcttgaccaatttgcagttactgctgctgaacgcg
aacgagatatcctgcatacgaaccgatctgttccgagatctgaccagcctgactctgttg
tcgctctacgataacaacatcagatccctggccaatggaactttcgccaatctacgaagc
attgaaacgctgcatttggcaagaaacccgttcatctgcgactgcaatctacgatggctg
aacgcgtatcttcacgcgcaccccatcgagacgtcgggagccaagtgcgagtcgccgaag
agggcgcagaagcggaagatcgattcgatgcgggacgacaagttcaaatgcgacgaggag
ctcttgacgaagagagctggcgagtgtatcctgcctggagaatgcccagaaccgtgcatt
tgcaacggagcgaccatcgattgctcgaacaagaaactaacatcgataccaaaagaacta
ccgatctacacgtccaccttactgttggccaacaatgagctggataagatcaaagcggat
ggcgtattcgaaaagctgccggagctgcagcatctggacctcaggaagaataaaatctcg
cgcatcgaggcctctgcgttttcaggcgctcacaaactcaccgacttactcttatcggag
aacaggctgagggaagttcacaacaagatgttcaccggcctgacgaatcttaagacgctg
aacctgcacggaaacgctataacctgcgttatgcacggctcgttcgacggattgacgcac
atacgcaccattaacatgcaaagcaatcctttgtcgtgtaattgtcatctcgcgtggttc
gccggatggctgagaaaacgcgacatgtctggcgttgtgggacactgtcacgaccctcca
cgattgaagagcgcaatcatcaaagatataccccatcacgagttcaaatgcaacaacgac
agcgtgggttgcctaggtgacgattactgtccaccccaatgtaattgcgccgggtcagtg
gtgagatgttcgaggtctcagcttacagagattccacgtgggattccgccggaaaccacc
gagctgtatttggacgtgaacgacatcaagacgatccagcccgagagactgaaccacctg
aggattctcactagactagacctaagcaacaatcagattggaatgctgtccaacgatacc
ttcaggaaccttaccaaactgtcccacctaattatcagctacaataagctgcagtgtgtc
caacgaaatgccctggccggcttgaaatcattgcggataatgtctctacacggtaacgac
atatcggtgatccctgagggcgcgttcgaggatcttcaatctataacacacctcgctctg
gggtccaacccgctctactgcgactgcagcatgcgatggttggccgaatgggtgaagaag
gattacgtggaggccggtatcgcgagatgcatggagccaccagcgatgagggacaagctg
ttgcttacgacacctgcgaccgcattccaatgcaaaaccaaccaacagccagccgaagtc
ctggccaagtgcgacctgtgctacacctcgccatgccagaacggaggattttgcgaggcg
ctcccggaccggaagttccgttgcaaatgcgcgccaggatatcatggggaccggtgtgaa
cataaaattgacgcgtgctatggaaatccttgccggaacgccggaacttgtaaagtattg
gaagaaggaagattcagttgcgactgcgcccccgggtacaagggacttcgatgcgagaac
aacgtcgacgactgcgagaacaacaagtgcgcgaataacgcaacctgcgtcgacctcgta
caggcctacagatgcgactgcaccccaggattcatgggcgagtattgcgaggagaagata
cccttttgcacaaaagggcacgacccctgcgagaacggaggtcgctgcgtcgaccacggg
acccactatagctgcgaatgcccaatcgggttcaccggcctcaattgttccaccaacctg
gatgactgcgttgatcatatgtgccagaacggtgctacttgcatcgacggcataaacaat
tacgaatgtaagtgcgcggcggaatatacaggcagatattgcgaggcagcaccgtcgaca
gccatgctctatccacaaactagtccatgtgcacaccatgactgtcagcacggtgcatgc
ttccaacctgctcccgcttccgccgcggactatctttgccagtgccaccccggctacacc
ggaaaacgatgcgagtacctgacgagtttgagcttcgtggacaacagctcgctggtcgag
ctggagccgctacgcatgaggcccgaagcgaacgtgaccatcgtcttcacgaccacgcag
gaaaacggggttctcctctacgacggccaaaacggtgatcacatcgccgtcgaattgttt
aatggccgtgtcagagtctcatacgacgtgggtaactatccaacctcgacgatgtacagc
tacgaaatgatcgccgatggtaaacctcacgtggctgagcttcttgcgatcaagaagaac
ttcacgatgagggtcgaccgtggccctgctagaagcattattaacgagggtccgaaggag
tacctgaaactcatcacgcctatgtatgtcggcggcgtcgctccggaagtcgccaacatc
gcgtttacagagtttcatctgaggaacatcaccagcttccaaggctgcatcaccgagatg
tggatcaatcacaaattggtagattttagcaacgcggcgaagatgcaccgcgtaactcct
ggatgcatgtcgaacgaggaagaagctgacgaggcgcgagacgtcatggaagcagaagga
attatgggcggcagcagcaacgaggaatcgatgccacaagagaatatggctcacgaacac
tccgacatcgttatgacaggacctggcgcgataatttccgatccctgtgcgacacacgag
tgcagaaaaggttcgcagtgcgtgccatcgccaatgggaaacggatatacgtgtcggtgt
caaactgggtggcaaggacggtattgcgagaaagcaccgacgtgtcgcaaagagcacacc
agagagtattacagcgagaacggatgtcggagtcgacgaccagtgaaacttgccaagtgt
tggggtagttgtggcaactcatgctgcctcccacggaagacgaaacggcgtaaggttcga
ttgatctgcgtcgacggtatgcggtacacgaaggacgtcgatctagtgcgcaaatgtacg
tgcacccggaaatgttactag
DBGET
integrated database retrieval system
