Bombus bifarius (two-form bumblebee): 117216203
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Entry
117216203 CDS
T07537
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbif03016
]
117216203
Enzymes [BR:
bbif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
117216203
Transfer RNA biogenesis [BR:
bbif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117216203
Prokaryotic type
117216203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
117216203
NCBI-ProteinID:
XP_033318664
UniProt:
A0A6P8NEN0
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MFRGNQYIIRNNLIFSRFIRLQYDNFFDKNMSSSIKQDENIIERSNKRQMIDESYEMITK
APKVEPTEDVVQRKNNVKRKNFVIMLGYVGRNYSGMQINRGTKTIEESLLSALLKANFIT
KEQFEDVREIKFQRAARTDKGVSAVRQVVSLQLPDYVNKEDINQYLPKDIRVFDVKRVTK
TFNSKNKCDARTYRYVLPTFVLAPEDSNFLQIDEEEGVNEEQRLKQLSMIDGKPYHEFRL
TPEMLDKLNEILKLLEGTHNFHNFTSKTKPLDPRAKRYIIYFRCVETFIANNMEFAVLEI
KGQSFMLHQIRKMVALVIGICRNIVTSDIIKDVFSVEKIDIPIAPGLGLSLHFVHYKYYN
ERFGKDGFHKTLEWQECNDDVDKFYKECILQDIIDEEISEKVMMHWLASILTPKRFAFKE
YVVQCEYVS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtggcaatcagtatattattagaaataatttaattttttcccgttttataaga
ttacaatacgataatttttttgataaaaacatgtcaagcagtattaaacaagatgagaat
attattgaacgaagtaataaaagacaaatgatcgatgaaagttatgaaatgataacaaaa
gctccaaaggtagaaccaactgaagatgtagtacaaagaaaaaacaacgttaaaaggaaa
aactttgtgataatgttaggttacgtgggcagaaattattctggtatgcaaattaatcgt
ggtacgaaaactattgaagaaagtttattatctgctttgttgaaagcaaattttattacg
aaagaacaatttgaagatgtaagagaaattaaatttcaaagagctgcacgtacagataaa
ggtgtatcagcagttaggcaagttgtttctctacaattgcctgattatgtaaacaaagaa
gatataaatcagtatcttccaaaggatatcagagtatttgatgtaaagagggtaacaaaa
acttttaatagtaaaaataaatgcgatgctagaacatacagatatgttcttcccacattt
gttttggctccagaagattcaaattttttacaaattgacgaagaggaaggagtaaatgaa
gaacaacgacttaaacaactatctatgatagatggaaagccatatcatgaattccgattg
actccagaaatgcttgacaagctaaatgaaattttgaaattattagaaggcacacataat
tttcataattttacatcgaaaacaaagccattagatccaagagccaagcgttatataata
tactttcgttgtgttgaaacatttattgcaaataatatggaatttgcagtactggaaata
aaaggacaaagttttatgttacatcaaattagaaaaatggtagctttagttatagggatt
tgtagaaatattgtgacaagtgatattatcaaagatgtattttcagtagaaaaaattgac
atccctattgcacctggtttaggactaagtttacattttgtacattataaatattataat
gaaagatttggaaaagatggatttcacaaaacattagaatggcaagaatgcaatgacgat
gttgacaaattttataaagaatgcattttacaggatataatagatgaggaaatatcagaa
aaagtaatgatgcattggttggcatctatcctaacaccaaagagatttgcatttaaagaa
tatgtagtacagtgtgaatatgtatcatga
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