Bombus bifarius (two-form bumblebee): 117216567
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Entry
117216567 CDS
T07537
Name
(RefSeq) uncharacterized protein LOC117216567
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
bbif
Bombus bifarius (two-form bumblebee)
Brite
KEGG Orthology (KO) [BR:
bbif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbif03021
]
117216567
Enzymes [BR:
bbif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117216567
5.6.2.5 RNA 5'-3' helicase
117216567
Transcription machinery [BR:
bbif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117216567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
Viral_helicase1
AAA_19
UvrD_C_2
Yop-YscD_cpl
AAA_30
SLFN-g3_helicase
PIF1
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
117216567
NCBI-ProteinID:
XP_033319251
UniProt:
A0A6P8MZG3
LinkDB
All DBs
Position
Unknown
AA seq
1764 aa
AA seq
DB search
MSADNYYRFILERINTSDIIVLDKPGHTYTCGRAKDNEIICLSLTVSRRHCMFFHRKNEL
YVTDLKSSNGIFINDIAQEPFQTTQLHSNDVIGIGCPTAADATENSDLYVYKLHSIGPRL
LEDGHSISTLSETIIVNNVNIVNNKSMTDRADKRKREDTNPNLEVASKIPKLQNENYILE
KNYLQEKDKEKNENDIEIVHISLNNSSSNGKNKNCDKLNAKKHMDANMPTSNNWTNNTRR
ESSIDDKLINCQDLRSNMIISTTKKDIKKGEISLNKSTEKVNANMLQEINTYTGNNLMYT
EDVQSTTNNLFYTKDVQNTANNLHNLKSKNTIKDSRIRVKSDLEIRNYNSKHSRRNSSET
NTVNEIRKPNTVDKTNQFKNNEEGDLLATLPSNFMYSKDGIIKFEDEFQLTDTDKNAILN
SSNTSFIPVGSPIKLKKVQQQPKTKFSEDDVINLSDSEDDIFPCSQLFDIGYGMNTTMKD
EVKEEQPTEVESERFGIDDVDFVISITDSEDEEDKNWFYRLSRSQIFSENDEIDLKSKNG
VKKEDIDINVVTKEPIVSEFELIETNEKLPNELVPRATIDEEKEAENSSLQDMDNLNKVF
LPENTLLQQFTSATSDTKKHSKSPKNQSLSPVQKEAGNYIHPLSKIETITPTKSKKSVEK
KVPQIEPPHLPTSRRRRSVSNKDKQIPEKSDKSVRSGNSEKYEKPSKPRLSAKEKKEQQE
KLKLEQYMHAKEQKNRKVLHKWASCLPPSTKKLNTLSKEEKKALADNRKMKLKKIAEENR
VSLAGNQEKKRIVSKPKAKVTTKSRNDFLVEETIAASREEIVTEESKSLSSRSATANRTS
SNAKTIDPTKRKNVFKEIAMDVQHKLTLNDISNLGKIPKKSNNTKIKINIVEAETVLKDL
SLEEKTEKTIKSKDTAVSGKPSLESYKTVEKGPSVPLKSNLKSPVKPNSKKRVSFSTEIQ
TVREYEIDESNVLKKLTGKDAPVRREKINTMNQFLCRILCWKPVWLEEQLYLNQDPPVIQ
PEELNPTLTHYRSYDEYYNTISSLLLLEIWHNITNKFQSIEDIHRRPTFMCSIVKNSIQT
NVEPNDILLTTLMIEVLATKDDIQKQIHPKYGDLVFFEYVQSHENSQKSKDFRKVFAYVT
NVHTTVLTPLTHFNRDLQNYVKDAHTLLTYSVITKYLDKNILVNRVQRLRAAFYLRPNLR
MVQALQFLPKSPLVNLILCPRIEMYKLPTVSELETLITGDKLNEKQMEAVSKITKAVIQK
DTKLCFIQGPPGTGKSKVIVNIVTQILYGNNRYTSNGSSFTMLVCAPSNAAIDDIVLRLL
EIRTMIKKQAEIKPFRMVRIGQSQMMHSKVKDISITELAKREIKKTCKSNTVPSDSIESE
KLFLQSKINALQCKLNSNNLDETHKDHVRMKLADMSAKYELLKNRTSTNEVNDKSRESIR
LQRAAEYKILDFADIITCTLSSCYTSQMEYIFGVNKKKISVCIVDEATQSCEAETLIPLM
LGIDTLVLVGDHNQLPATVLSTRAKKYGLDQSIFSRVQSAFDLQPNNPIIMLDTQYRMQP
DISSWPNKFFYGCKLKNAVECNDNFPFHSYRILNLVTNQNHDNSNNEEADFVANIIYCML
NFANLDNWQSCISCGILTPYNNQRAMILTKVNEKISSLPENVKGKIKYIVDTVDRFQGQE
CDVIILSCVRSQKIGFLSDRQRLCVALTRAKHSLIICGNFNIFMRYPMWNSLIADAKARK
VFFNVNPNANSHEIKSYVIKRVMK
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgataactactaccgatttatattggaacgtattaatacttcggacataatt
gtattagataaaccaggacatacatatacttgtggtagagccaaggataatgaaataata
tgccttagtctgacagtatctagacgccattgtatgtttttccatagaaaaaatgaatta
tatgttacagatttaaagagctcgaatggtatatttataaatgacatagctcaagagccc
tttcagacaactcaattacactcgaatgatgttattggcattggatgtcccactgctgca
gatgcaactgaaaacagtgatctatatgtgtataaactacattcaattggaccacgactt
ctggaagatggtcacagtattagtacactttcagaaactattatagtaaataatgtaaat
atagttaataataagtcaatgactgacagagcagataaacgtaaaagagaagacacgaat
cccaacttggaagtggcaagtaaaattcccaagttgcaaaatgaaaattatatcttagaa
aaaaattatctgcaagaaaaggataaagagaaaaatgaaaatgatattgaaatagttcat
atttcattgaataacagttcatcaaatggaaaaaataaaaattgtgataaattaaatgca
aagaaacatatggatgccaacatgcctacatcaaataattggacaaacaatacaagaaga
gaatcatcaatagatgataaattaataaattgtcaggacctgagatcaaatatgataata
agcaccacaaaaaaagatattaaaaaaggggaaatttctctcaataagagtacagagaaa
gtaaatgcaaatatgttacaagagattaatacttatactggaaataatttaatgtatact
gaagatgtacagagtacaacaaataatttattctatactaaagatgtacagaatacagca
aataatttacataatcttaaatctaaaaatacaattaaggacagtagaataagagtaaaa
tctgatttagaaatcaggaattacaactcaaaacacagtagaagaaatagtagtgaaaca
aatactgtgaatgaaatacgaaaaccaaatacagttgataaaaccaatcaatttaaaaac
aatgaagaaggagatttactcgcaacacttccttcaaatttcatgtatagcaaggatggt
atcataaaatttgaagatgaattccaattaaccgatactgataaaaatgctattttaaat
tcctcgaatacaagtttcattccagtcggatctccaataaaactaaagaaagtgcaacaa
caaccaaaaacaaaattttcagaggacgatgttataaacttaagcgatagtgaggatgat
atttttccgtgctcccaactgtttgatattggctatggtatgaacacaaccatgaaagat
gaggtaaaagaggaacaacctacagaagtagaaagtgagagatttggtatagatgatgtg
gattttgttatttcaataacagatagtgaagatgaagaagataagaattggttttacaga
ttatcccgaagtcaaatattcagcgaaaacgatgaaattgatctgaaaagtaagaatggt
gtaaaaaaagaagatatagatataaatgtcgtaactaaggaaccaattgtaagcgagttt
gaattaatcgaaactaatgaaaagctaccaaatgagttagttcctagagcaaccatagac
gaagaaaaagaagcagagaactcgtctttgcaggatatggacaatttaaataaagtattt
ttaccagaaaatactttacttcaacaattcacgagcgctactagtgatactaaaaaacat
tctaagtctccgaaaaatcagagtttgtctccagtgcaaaaagaggcaggaaattatatt
catcccttgagtaaaatagaaactattacacctaccaagagcaaaaagtcggttgagaaa
aaggtgcctcaaatcgaacctccacacttacctacctccagaagacgaagaagtgtttct
aataaagataaacaaatccctgaaaagtctgataaatctgtaagatctggaaattctgaa
aaatatgaaaaaccttcgaaaccgcgattaagtgctaaagaaaagaaagaacaacaagaa
aagttgaagttagagcaatatatgcatgcaaaggagcaaaagaatcgtaaagtacttcac
aaatgggccagttgtcttccccctagtacaaagaaattaaatactctttctaaggaagag
aagaaagcattggcagataatagaaagatgaaattgaagaaaatcgccgaagaaaaccgg
gtatctttagcaggtaatcaagaaaagaaacgtattgtttctaaaccaaaagcgaaagta
acgacaaagtcccgaaacgatttccttgtcgaggagacgatcgctgcatctagagaggaa
attgtaacagaggagtctaaatctttgtctagtcgatccgcaacagcaaatagaacttct
tcaaatgcaaaaacgattgatccaacaaaacgtaaaaatgtctttaaagaaatagcaatg
gatgtacagcataaattaactcttaatgatatttccaatttgggaaaaattcctaaaaaa
tctaataatactaaaataaaaataaatatcgtagaagcagaaacagtattaaaagatctt
tcattggaagaaaaaacagagaaaacaattaaatcgaaagatactgcagtaagtggtaaa
ccaagcttagaatcttataagacagtggaaaagggaccttctgtacctcttaagtcaaat
cttaagtcacctgtaaaaccgaattcgaagaaacgagtgtctttttctacagagattcaa
actgttcgtgaatatgaaattgatgaatcaaatgttctaaaaaaactgacaggaaaagat
gctcctgtacgtcgagaaaagatcaatacaatgaatcaatttttatgccgcatcttatgc
tggaaaccagtgtggttggaagaacagctatatttgaatcaagatccacctgttattcag
cctgaagaacttaaccctaccttaacccattatagatcgtatgatgaatattataatact
ataagttcgcttttgttgctggaaatttggcataatatcacaaacaaatttcagagcata
gaggatatacacagacggcccacattcatgtgctctatagttaaaaactctattcagacg
aatgtggagccaaatgatatacttcttacaacgttgatgatagaagtattagccacaaag
gacgatatacaaaagcaaattcatcctaagtatggggaccttgtattttttgagtatgtt
caaagtcacgaaaactcacaaaaatcaaaagattttcgtaaagtgttcgcatatgttact
aacgtacacacaacagtattaacgcctctgacacattttaacagagatttacaaaattac
gtaaaagatgctcatacattgttaacatatagtgtgataacaaaatacctcgataaaaat
attctagtgaatcgagttcaacgattaagagctgcattttatttacgtcctaatttacga
atggtacaagcattgcaatttctccctaaatcgccattagtaaacttaatcttatgtcca
agaatcgagatgtacaagttgccaactgtttctgaattagagacattgatcacaggagat
aaattaaatgagaaacagatggaagctgtaagcaaaataaccaaagcagtaatccaaaaa
gataccaaattgtgttttattcaaggaccacctggaactggaaaatcgaaagttattgta
aatatagttactcaaattttgtatggaaataacagatatacaagcaatggaagttctttt
actatgttagtttgtgctccatcaaatgcagccattgatgacattgtcttaagattatta
gaaattagaaccatgattaaaaagcaggcagagataaaaccatttaggatggttcgtatt
gggcaatcacaaatgatgcattcaaaagtgaaagatatttctattactgaattggcgaaa
cgagaaattaaaaaaacatgcaagtcgaacactgttccatccgatagtatagaaagtgaa
aaattatttttacaatctaagattaacgcccttcaatgtaagctgaactcaaataatttg
gatgaaactcataaagaccatgttaggatgaaactggcagatatgtctgcaaaatacgag
ttactaaagaatcgtacatcaacgaacgaagtaaatgataaaagcagagaaagcattaga
ttgcagcgtgcggcagaatacaaaattcttgactttgcagacataataacctgcaccctc
tcatcctgttatactagtcaaatggagtatatttttggtgttaataagaaaaagatatct
gtgtgtattgtggatgaagctactcaaagttgcgaggcagaaaccttgataccattgatg
ttaggaatagatacattggttttagttggtgatcataatcaattaccagctactgttctg
agtacacgggcaaagaaatatgggttggatcaatcgatcttttctcgagtgcaaagcgcc
tttgatttacaaccaaataatcccataattatgctagacactcaatatcgaatgcaacct
gatatttcctcttggccaaataagttcttctatggttgtaaattaaagaatgcagtagaa
tgcaatgataactttccattccattcatatcgaattttaaatttggttacaaatcagaat
catgataactcaaacaatgaagaagcagattttgtagctaatattatttattgtatgcta
aactttgccaatttggataattggcaatcatgcatttcgtgcggaattcttacaccatat
aataatcaaagagctatgatattgactaaagttaatgaaaaaatatcttcgttgccagag
aatgttaagggaaaaataaaatatattgtggacactgtagatcgttttcaaggtcaagaa
tgtgatgtgataattttgtcatgtgtgcggagtcagaagatcggctttctatcagataga
caaagactttgtgttgcacttacaagagcaaaacacagcctgataatatgtggtaacttt
aacattttcatgaggtatccaatgtggaattcattaatagcagacgcgaaagcgcgtaaa
gtattttttaatgttaatcccaacgcgaattctcatgaaatcaaatcttacgtaattaaa
cgtgtgatgaaataa
DBGET
integrated database retrieval system
